Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-r.7   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.9   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-e.2   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.bio   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.hor   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.lig   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.str   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 ath-m.4.tis   AT5G61220   LYR family of Fe/S cluster biogenesis protein 
 bra-r.6   103854939   LYR motif-containing protein 4B 
 bra-r.6   103852848   LYR motif-containing protein 4 
 bra-r.6   103860576   LYR motif-containing protein 4B 
 bna-r.1   111204151   LYR motif-containing protein 4B-like 
 bna-r.1   125592023   uncharacterized LOC125592023 
 bna-r.1   125581574   LYR motif-containing protein 4B-like 
 ghi-r.1   107951248   LYR motif-containing protein 4 
 ghi-r.1   121211040   LYR motif-containing protein 4 
 cit-r.1   102612469   uncharacterized LOC102612469 
 gma-u.5   100814057   LYR motif-containing protein 4 
 gma-u.5   100802369   LYR motif-containing protein 4B 
 vvi-u.5   100251894   uncharacterized LOC100251894 
 mtr-u.5   11425092   LYR motif-containing protein 4 
 sly-u.5   101253174   uncharacterized LOC101253174 
 sot-r.1   102602025   LYR motif-containing protein 4 
 osa-u.5   4348587   uncharacterized LOC4348587 
 osa-u.5   4345028   uncharacterized LOC4345028 
 zma-u.5   100280962   catalytic/ oxidoreductase, acting on NADH or NADPH 
 zma-u.5   100284347   catalytic/ oxidoreductase, acting on NADH or NADPH 
 tae-r.2   123085328   LYR motif-containing protein 4 
 tae-r.2   123092714   LYR motif-containing protein 4 
 tae-r.2   123098013   LYR motif-containing protein 4 
 hvu-r.1   123449110   LYR motif-containing protein 4-like 
 hvu-r.1   123449113   LYR motif-containing protein 4-like 
 sbi-r.1   8054315   LYR motif-containing protein 4 
 bdi-r.1   100833210   LYR motif-containing protein 4 
 bdi-r.1   100829427   LYR motif-containing protein 4 
 cre-r.1   CHLRE_08g382850v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT5G61220 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G61220 (ath-u.5 coexpression data)

CoexMap"836243"


athAT5G61220 | Entrez gene ID : 836243      
Species ath bra bna ghi cit gma vvi mtr sly sot osa zma tae hvu sbi bdi cre ppo nta
Paralog 9 3 3 2 1 2 1 1 1 1 2 2 3 2 1 2 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (26 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
Protein NP_001330535.1 [sequence] [blastp]
NP_001330536.1 [sequence] [blastp]
NP_200930.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001330535.1)
chlo 10  (predict for NP_001330536.1)
chlo 10  (predict for NP_200930.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001330535.1)
mito 5  (predict for NP_001330536.1)
mito 5  (predict for NP_200930.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G61220
ath-r.7
for
AT5G61220
ath-m.9
for
AT5G61220
ath-e.2
for
AT5G61220
ath-m.4.bio
for
AT5G61220
ath-m.4.hor
for
AT5G61220
ath-m.4.lig
for
AT5G61220
ath-m.4.str
for
AT5G61220
ath-m.4.tis
for
AT5G61220
bra-r.6
for
103854939
bra-r.6
for
103852848
bra-r.6
for
103860576
bna-r.1
for
111204151
bna-r.1
for
125592023
bna-r.1
for
125581574
ghi-r.1
for
107951248
ghi-r.1
for
121211040
cit-r.1
for
102612469
gma-u.5
for
100814057
gma-u.5
for
100802369
vvi-u.5
for
100251894
mtr-u.5
for
11425092
sly-u.5
for
101253174
sot-r.1
for
102602025
osa-u.5
for
4348587
osa-u.5
for
4345028
zma-u.5
for
100280962
zma-u.5
for
100284347
tae-r.2
for
123085328
tae-r.2
for
123092714
tae-r.2
for
123098013
hvu-r.1
for
123449110
hvu-r.1
for
123449113
sbi-r.1
for
8054315
bdi-r.1
for
100833210
bdi-r.1
for
100829427
cre-r.1
for
CHLRE_08g382850v5


Ortholog ID: 5870
Species ath bra bra bra bna bna bna ghi ghi cit gma gma vvi mtr sly sot osa osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol AT5G61220 LOC103854939 LOC103852848 LOC103860576 LOC111204151 LOC125581574 LOC106439938 LOC107951248 LOC121211040 LOC102612469 LOC100814057 LOC100802369 LOC100251894 LOC11425092 LOC101253174 LOC102602025 LOC4348587 LOC4345028 LOC100280962 LOC100284347 LOC123085328 LOC123092714 LOC123098013 LOC123449110 LOC123449113 LOC8054315 LOC100833210 LOC100829427 CHLRE_08g382850v5
Function* LYR family of Fe/S cluster biogenesis protein LYR motif-containing protein 4B LYR motif-containing protein 4 LYR motif-containing protein 4B LYR motif-containing protein 4B-like LYR motif-containing protein 4B-like LYR motif-containing protein 4B-like LYR motif-containing protein 4 LYR motif-containing protein 4 uncharacterized LOC102612469 LYR motif-containing protein 4 LYR motif-containing protein 4B uncharacterized LOC100251894 LYR motif-containing protein 4 uncharacterized LOC101253174 LYR motif-containing protein 4 uncharacterized LOC4348587 uncharacterized LOC4345028 catalytic/ oxidoreductase, acting on NADH or NADPH catalytic/ oxidoreductase, acting on NADH or NADPH LYR motif-containing protein 4 LYR motif-containing protein 4 LYR motif-containing protein 4 LYR motif-containing protein 4-like LYR motif-containing protein 4-like LYR motif-containing protein 4 LYR motif-containing protein 4 LYR motif-containing protein 4 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
vvi03010 Ribosome 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly00190 Oxidative phosphorylation 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 10
osa04145 Phagosome 7
osa04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae03060 Protein export 3
tae04145 Phagosome 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 4
cre00630 Glyoxylate and dicarboxylate metabolism 4
cre01200 Carbon metabolism 4
cre00670 One carbon pool by folate 3
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836243 103854939 103852848 103860576 111204151 125581574 106439938 107951248 121211040 102612469 100814057 100802369 100251894 11425092 101253174 102602025 4348587 4345028 100280962 100284347 123085328 123092714 123098013 123449110 123449113 8054315 100833210 100829427 5719831
The preparation time of this page was 0.1 [sec].