[][] ath   AT1G01080 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_001030925.1  NP_001320997.1  NP_171616.1 
BLAST NP_001030925.1  NP_001320997.1  NP_171616.1 
Orthologous [Ortholog page] LOC4344522 (osa)LOC7455363 (ppo)LOC100193009 (zma)LOC100785171 (gma)LOC100792560 (gma)LOC100803098 (gma)LOC103844620 (bra)LOC104881854 (vvi)
Subcellular
localization
wolf
chlo 9  (predict for NP_001030925.1)
chlo 9  (predict for NP_001320997.1)
chlo 9  (predict for NP_171616.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001030925.1)
chlo 9  (predict for NP_001320997.1)
chlo 9  (predict for NP_171616.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath00860 Porphyrin and chlorophyll metabolism 3
Genes directly connected with AT1G01080 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.6 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 818107
8.4 FLU Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820628
8.3 PSRP2 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824379
7.2 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 822132
Coexpressed
gene list
[Coexpressed gene list for AT1G01080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261577_at
261577_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261577_at
261577_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
261577_at
261577_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839463    
Refseq ID (protein) NP_001030925.1 
NP_001320997.1 
NP_171616.1 


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