ATTED-II : GeneID search result

[←][→] ath AT1G01320 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO CC

GO:0005576 [list] [network] extracellular region	(3363 genes)	HDA
GO:0005829 [list] [network] cytosol	(3506 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA ISM

GO MF

KEGG

Protein

NP_001184884.1 NP_001321495.1 NP_171639.3

BLAST

NP_001184884.1 NP_001321495.1 NP_171639.3

Orthologous

[Ortholog page] LOC4343046 (osa) LOC7457397 (ppo) LOC25500695 (mtr) LOC100263581 (vvi) LOC100784117 (gma) LOC100808136 (gma) LOC101251035 (sly) LOC101267609 (sly) LOC103844641 (bra)

Subcellular
localization
wolf

nucl 4, cyto 4, mito 1, pero 1, cysk 1	(predict for NP_001184884.1)
nucl 4, cyto 4, mito 1, pero 1, cysk 1	(predict for NP_001321495.1)
nucl 4, cyto 4, mito 1, pero 1, cysk 1	(predict for NP_171639.3)

Subcellular
localization
TargetP

other 9	(predict for NP_001184884.1)
other 9	(predict for NP_001321495.1)
other 9	(predict for NP_171639.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00906	Carotenoid biosynthesis	2

Genes directly connected with AT1G01320 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.4	AT4G28080	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	828923
9.2	PTAC2	plastid transcriptionally active 2	[detail]	843824
8.2	TOC159	translocon at the outer envelope membrane of chloroplasts 159	[detail]	827934
8.2	MRL1	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	829635

Coexpressed
gene list

[Coexpressed gene list for AT1G01320]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261054_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261054_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261054_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839293
Refseq ID (protein)	NP_001184884.1
	NP_001321495.1
	NP_171639.3

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