[←][→] ath   AT1G01860 Gene
functional annotation
Function   Ribosomal RNA adenine dimethylase family protein  
GO BP
GO:0080009 [list] [network] mRNA methylation  (6 genes)  ISS  
GO:0031167 [list] [network] rRNA methylation  (30 genes)  IBA  
GO:0009409 [list] [network] response to cold  (411 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA ISM  
GO MF
GO:0016422 [list] [network] mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity  (1 genes)  ISS  
GO:0000179 [list] [network] rRNA (adenine-N6,N6-)-dimethyltransferase activity  (3 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_001322239.1  NP_001322240.1  NP_001322241.1  NP_001322242.1  NP_171690.1 
BLAST NP_001322239.1  NP_001322240.1  NP_001322241.1  NP_001322242.1  NP_171690.1 
Orthologous [Ortholog page] LOC9271200 (osa)  LOC11432602 (mtr)  LOC100264412 (vvi)  LOC100285018 (zma)  LOC100780381 (gma)  LOC100790726 (gma)  LOC101258502 (sly)  LOC103843813 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 2,  extr 1,  mito 1,  vacu 1  (predict for NP_001322239.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  vacu 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001322240.1)
cyto 9,  mito 1  (predict for NP_001322241.1)
cyto 9,  mito 1  (predict for NP_001322242.1)
chlo 7,  cyto 1,  extr 1,  vacu 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_171690.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001322239.1)
chlo 9  (predict for NP_001322240.1)
other 8  (predict for NP_001322241.1)
other 8  (predict for NP_001322242.1)
chlo 9  (predict for NP_171690.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
Genes directly connected with PFC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 GYRB1 DNA gyrase subunit B [detail] 820189
6.3 AT1G60990 Glycine cleavage T-protein family [detail] 842391
6.2 AT5G19210 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 832041
5.2 AT5G54090 DNA mismatch repair protein MutS, type 2 [detail] 835495
4.6 AL5 alfin-like 5 [detail] 832173
3.7 AT1G49980 DNA/RNA polymerases superfamily protein [detail] 841422
Coexpressed
gene list		 [Coexpressed gene list for PFC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261652_at
261652_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261652_at
261652_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261652_at
261652_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839283      
Refseq ID (protein) NP_001322239.1 
NP_001322240.1 
NP_001322241.1 
NP_001322242.1 
NP_171690.1 


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