[][] ath   AT1G01930 Gene
functional annotation
Function   zinc finger protein-like protein
GO BP
GO:0071630 [list] [network] nuclear protein quality control by the ubiquitin-proteasome system  (1 genes)  IBA  
GO:0072671 [list] [network] mitochondria-associated ubiquitin-dependent protein catabolic process  (1 genes)  IBA  
GO:0030433 [list] [network] ubiquitin-dependent ERAD pathway  (36 genes)  IBA  
GO CC
GO:0036266 [list] [network] Cdc48p-Npl4p-Vms1p AAA ATPase complex  (1 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
KEGG
Protein NP_563641.1 
BLAST NP_563641.1 
Orthologous [Ortholog page] LOC4336732 (osa)LOC7461725 (ppo)LOC11435360 (mtr)LOC25498875 (mtr)LOC100254117 (vvi)LOC100527709 (gma)LOC100808912 (gma)LOC101256416 (sly)LOC103843817 (bra)
Subcellular
localization
wolf
nucl 9  (predict for NP_563641.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563641.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with AT1G01930 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.4 RRC1 RNA recognition motif (RRM)-containing protein [detail] 832577
6.9 AT5G20170 RNA polymerase II transcription mediator [detail] 832140
6.6 AT1G03910 cactus-binding carboxy-terminal, cactin [detail] 839371
5.9 AT4G37440 hypothetical protein [detail] 829898
Coexpressed
gene list
[Coexpressed gene list for AT1G01930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261625_at
261625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261625_at
261625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
261625_at
261625_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839310    
Refseq ID (protein) NP_563641.1 


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