[←][→] ath   At1g01940 Gene
functional annotation
Function   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034605 [list] [network] cellular response to heat  (49 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (105 genes)  IMP  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (28 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030623 [list] [network] U5 snRNA binding  (1 genes)  IDA  
GO:0030620 [list] [network] U2 snRNA binding  (3 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_171696.2 
BLAST NP_171696.2 
Orthologous [Ortholog page] LOC4340003 (osa)  LOC7461724 (ppo)  LOC7464871 (ppo)  LOC25501005 (mtr)  CYP42 (gma)  LOC100777417 (gma)  LOC101258772 (sly)  LOC103843818 (bra)  LOC123088204 (tae)  LOC123152132 (tae)  LOC123168872 (tae)  LOC123413563 (hvu) 
Subcellular
localization
wolf
cysk 6,  cyto 4  (predict for NP_171696.2)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_171696.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
Genes directly connected with AT1G01940 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.8 BOB1 HSP20-like chaperones superfamily protein [detail] 835421
7.2 FUS5 Proteasome component (PCI) domain protein [detail] 839241
6.9 AT1G30070 SGS domain-containing protein [detail] 839886
4.6 AT4G39235 uncharacterized protein [detail] 830079
4.2 AT3G56250 uncharacterized protein [detail] 824791
Coexpressed
gene list		 [Coexpressed gene list for AT1G01940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261655_at
261655_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261655_at
261655_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261655_at
261655_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839309      
Refseq ID (protein) NP_171696.2 


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