[←][→] ath   At1g02080 Gene
functional annotation
Function   transcription regulator    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001184889.1  NP_001321578.1  NP_171710.4 
BLAST NP_001184889.1  NP_001321578.1  NP_171710.4 
Orthologous [Ortholog page] LOC4331296 (osa)  LOC7483819 (ppo)  LOC9272729 (osa)  LOC11429926 (mtr)  LOC18105172 (ppo)  LOC100783935 (gma)  LOC100803794 (gma)  LOC101267935 (sly)  LOC103843826 (bra)  LOC103844691 (bra)  LOC103850259 (bra)  LOC123051887 (tae)  LOC123093957 (tae)  LOC123099134 (tae)  LOC123106092 (tae)  LOC123127893 (tae)  LOC123181624 (tae)  LOC123438675 (hvu)  LOC123449980 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001184889.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001321578.1)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for NP_171710.4)
Subcellular
localization
TargetP
other 6  (predict for NP_001184889.1)
other 6  (predict for NP_001321578.1)
chlo 5,  other 5  (predict for NP_171710.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G02080 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.4 TOR target of rapamycin [detail] 841427
14.4 UPL2 ubiquitin-protein ligase 2 [detail] 843368
14.0 BIG auxin transport protein (BIG) [detail] 820398
13.6 CCT RNA polymerase II transcription mediator [detail] 827954
12.0 GCT RNA polymerase II transcription mediator [detail] 841978
11.9 AT5G15680 ARM repeat superfamily protein [detail] 831422
10.6 MOR1 ARM repeat superfamily protein [detail] 818131
10.4 GSL10 glucan synthase-like 10 [detail] 819903
10.2 AT2G26780 ARM repeat superfamily protein [detail] 817219
9.9 AT1G23230 mediator of RNA polymerase II transcription subunit [detail] 838932
9.6 EMB2016 embryo defective 2016 [detail] 819736
8.9 AT5G47480 RGPR-like protein [detail] 834798
8.6 AT1G27430 GYF domain-containing protein [detail] 839633
8.6 AT1G27595 symplekin [detail] 839651
7.9 EMB1135 RING/FYVE/PHD zinc finger superfamily protein [detail] 844273
7.4 TPR2 TOPLESS-related 2 [detail] 820936
7.4 AT5G06120 ARM repeat superfamily protein [detail] 830499
Coexpressed
gene list		 [Coexpressed gene list for AT1G02080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264168_at
264168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264168_at
264168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264168_at
264168_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839244      
Refseq ID (protein) NP_001184889.1 
NP_001321578.1 
NP_171710.4 


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