[←][→] ath   At1g02120 Gene
functional annotation
Function   GRAM domain family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0043069 [list] [network] negative regulation of programmed cell death  (28 genes)  IMP  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IMP  
GO:0009751 [list] [network] response to salicylic acid  (438 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001321165.1  NP_001321166.1  NP_171714.2 
BLAST NP_001321165.1  NP_001321166.1  NP_171714.2 
Orthologous [Ortholog page] LOC4343272 (osa)  LOC7483798 (ppo)  LOC18105064 (ppo)  LOC25500049 (mtr)  LOC100805910 (gma)  VAD1 (gma)  LOC101257108 (sly)  LOC103844693 (bra)  LOC123044765 (tae)  LOC123052659 (tae)  LOC123188524 (tae)  LOC123426019 (hvu) 
Subcellular
localization
wolf
nucl 6,  cysk 1,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001321165.1)
nucl 7,  cysk 1,  chlo 1,  cyto 1,  cysk_plas 1  (predict for NP_001321166.1)
nucl 5,  chlo 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_171714.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001321165.1)
chlo 8  (predict for NP_001321166.1)
chlo 8  (predict for NP_171714.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 3
ath00561 Glycerolipid metabolism 2
Genes directly connected with VAD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 NHX5 sodium hydrogen exchanger 5 [detail] 841878
6.3 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836731
6.0 AT1G48430 Dihydroxyacetone kinase [detail] 841264
5.6 CNGC6 cyclic nucleotide-gated channel 6 [detail] 816931
Coexpressed
gene list		 [Coexpressed gene list for VAD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264172_at
264172_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264172_at
264172_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264172_at
264172_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839232      
Refseq ID (protein) NP_001321165.1 
NP_001321166.1 
NP_171714.2 


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