[←][→] ath   At1g02500 Gene
functional annotation
Function   S-adenosylmethionine synthetase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009693 [list] [network] ethylene biosynthetic process  (22 genes)  TAS  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004478 [list] [network] methionine adenosyltransferase activity  (3 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00999 [list] [network] Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis (66 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_171751.1  NP_849577.1 
BLAST NP_171751.1  NP_849577.1 
Orthologous [Ortholog page] SAM1 (sly)  SAM3 (sly)  MAT3 (ath)  MTO3 (ath)  SAM-2 (ath)  LOC4325163 (osa)  LOC4326996 (osa)  LOC4337733 (osa)  LOC7468135 (ppo)  LOC7478878 (ppo)  LOC7495188 (ppo)  LOC7498224 (ppo)  LOC11432371 (mtr)  LOC11435308 (mtr)  LOC11444997 (mtr)  LOC18100144 (ppo)  LOC18109929 (ppo)  LOC18109930 (ppo)  LOC25483956 (mtr)  LOC25486640 (mtr)  LOC100146080 (tae)  LOC100777770 (gma)  LOC100778809 (gma)  LOC100787994 (gma)  LOC100794248 (gma)  LOC100799139 (gma)  LOC100805448 (gma)  LOC100812341 (gma)  LOC100816602 (gma)  LOC100820392 (gma)  LOC101245012 (sly)  SAM2 (sly)  LOC103836799 (bra)  LOC103839308 (bra)  LOC103849483 (bra)  LOC103857642 (bra)  LOC103858801 (bra)  LOC103859706 (bra)  LOC103865564 (bra)  LOC103867247 (bra)  LOC123048309 (tae)  LOC123061198 (tae)  LOC123069861 (tae)  LOC123078269 (tae)  LOC123127932 (tae)  LOC123127933 (tae)  LOC123136783 (tae)  LOC123137699 (tae)  LOC123137700 (tae)  LOC123145026 (tae)  LOC123145027 (tae)  LOC123405946 (hvu)  LOC123405986 (hvu)  LOC123406099 (hvu)  LOC123406276 (hvu) 
Subcellular
localization
wolf
cyto 6,  cysk 4  (predict for NP_171751.1)
cyto 6,  cysk 4  (predict for NP_849577.1)
Subcellular
localization
TargetP
other 8  (predict for NP_171751.1)
other 8  (predict for NP_849577.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00270 Cysteine and methionine metabolism 6
ath01200 Carbon metabolism 6
ath00940 Phenylpropanoid biosynthesis 5
ath01240 Biosynthesis of cofactors 4
Genes directly connected with SAM1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.7 SAM-2 S-adenosylmethionine synthetase 2 [detail] 826987
9.0 HOG1 S-adenosyl-L-homocysteine hydrolase [detail] 827028
8.7 LysoPL2 lysophospholipase 2 [detail] 841709
7.8 PDE345 Aldolase superfamily protein [detail] 814643
4.7 CINV1 cytosolic invertase 1 [detail] 840454
Coexpressed
gene list		 [Coexpressed gene list for SAM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260913_at
260913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260913_at
260913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260913_at
260913_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839501      
Refseq ID (protein) NP_171751.1 
NP_849577.1 


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