[←][→] ath   At1g02560 Gene
functional annotation
Function   nuclear encoded CLP protease 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006778 [list] [network] porphyrin-containing compound metabolic process  (217 genes)  IEA  
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IEA  
GO:0048827 [list] [network] phyllome development  (732 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG
Protein NP_563657.1 
BLAST NP_563657.1 
Orthologous [Ortholog page] clpP2 (sly)  LOC4332615 (osa)  LOC7455425 (ppo)  LOC7481404 (ppo)  LOC11412270 (mtr)  LOC11426620 (mtr)  LOC100798621 (gma)  LOC100802533 (gma)  LOC103836649 (bra)  LOC103844577 (bra)  LOC123085673 (tae)  LOC123092330 (tae)  LOC123097672 (tae)  LOC123448819 (hvu) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_563657.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_563657.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPP5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.2 CLPP3 CLP protease proteolytic subunit 3 [detail] 842985
11.3 CLPP6 CLP protease proteolytic subunit 6 [detail] 837719
11.0 CLPR4 CLP protease R subunit 4 [detail] 827412
9.9 CLPR1 CLP protease proteolytic subunit 1 [detail] 841420
9.6 CLPP4 CLP protease P4 [detail] 834575
Coexpressed
gene list		 [Coexpressed gene list for CLPP5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260912_at
260912_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260912_at
260912_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260912_at
260912_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839433      
Refseq ID (protein) NP_563657.1 


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