| functional annotation |
| Function |
methylcrotonyl-CoA carboxylase alpha chain |
|
| GO BP |
|
GO:0006552 [list] [network] leucine catabolic process
|
(6 genes)
|
IDA
IEA
|
 |
|
| GO CC |
|
| GO MF |
|
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity
|
(2 genes)
|
IDA
|
|
|
GO:0050897 [list] [network] cobalt ion binding
|
(51 genes)
|
IDA
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
| KEGG |
ath00280 [list] [network] Valine, leucine and isoleucine degradation (51 genes) |
 |
| Protein |
NP_563674.1
NP_849583.1
|
| BLAST |
NP_563674.1
NP_849583.1
|
| Orthologous |
[Ortholog page]
LOC543993 (sly)
MCCA (gma)
LOC4352741 (osa)
LOC7464698 (ppo)
LOC11431272 (mtr)
LOC100280665 (zma)
LOC100804850 (gma)
LOC100853875 (vvi)
LOC103843706 (bra)
|
Subcellular
localization
wolf |
|
mito 9,
chlo 1
|
(predict for NP_563674.1)
|
|
mito 9,
chlo 1
|
(predict for NP_849583.1)
|
|
Subcellular
localization
TargetP |
|
mito 8
|
(predict for NP_563674.1)
|
|
mito 8
|
(predict for NP_849583.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00280 |
Valine, leucine and isoleucine degradation |
8 |
 |
| ath00640 |
Propanoate metabolism |
4 |
 |
| ath00350 |
Tyrosine metabolism |
2 |
 |
| ath01230 |
Biosynthesis of amino acids |
2 |
 |
| ath00250 |
Alanine, aspartate and glutamate metabolism |
2 |
 |
Genes directly connected with MCCA on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.4 |
BCE2 |
2-oxoacid dehydrogenases acyltransferase family protein |
[detail] |
819869 |
| 13.0 |
ETFQO |
electron-transfer flavoprotein:ubiquinone oxidoreductase |
[detail] |
818941 |
| 12.3 |
DIN4 |
Transketolase family protein |
[detail] |
820547 |
| 11.2 |
IVD |
isovaleryl-CoA-dehydrogenase |
[detail] |
823668 |
| 11.1 |
MCCB |
3-methylcrotonyl-CoA carboxylase |
[detail] |
829549 |
| 10.4 |
SEN1 |
Rhodanese/Cell cycle control phosphatase superfamily protein |
[detail] |
829730 |
| 9.6 |
ACBP3 |
acyl-CoA-binding domain 3 |
[detail] |
828524 |
| 9.6 |
AT1G18270 |
ketose-bisphosphate aldolase class-II family protein |
[detail] |
838407 |
| 9.3 |
STY46 |
ACT-like protein tyrosine kinase family protein |
[detail] |
830003 |
| 8.8 |
HGO |
homogentisate 1,2-dioxygenase |
[detail] |
835494 |
| 8.7 |
ALDH6B2 |
aldehyde dehydrogenase 6B2 |
[detail] |
815903 |
| 8.7 |
AT2G31810 |
ACT domain-containing small subunit of acetolactate synthase protein |
[detail] |
817738 |
| 8.6 |
AKINBETA1 |
5'-AMP-activated protein kinase beta-2 subunit protein |
[detail] |
832243 |
| 8.5 |
ASN1 |
glutamine-dependent asparagine synthase 1 |
[detail] |
823888 |
| 7.8 |
AT2G40420 |
Transmembrane amino acid transporter family protein |
[detail] |
818635 |
| 7.4 |
PDS1 |
4-hydroxyphenylpyruvate dioxygenase |
[detail] |
837168 |
| 7.3 |
WRI4 |
Integrase-type DNA-binding superfamily protein |
[detail] |
844309 |
| 7.1 |
AT1G21400 |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein |
[detail] |
838739 |
| 6.9 |
UKL3 |
uridine kinase-like 3 |
[detail] |
842031 |
| 5.9 |
AGT3 |
alanine:glyoxylate aminotransferase 3 |
[detail] |
818421 |
| 5.7 |
AT5G14470 |
GHMP kinase family protein |
[detail] |
831298 |
| 5.5 |
ATTPS6 |
UDP-Glycosyltransferase / trehalose-phosphatase family protein |
[detail] |
843130 |
| 5.2 |
AT4G19160 |
transglutaminase family protein |
[detail] |
827654 |
|
Coexpressed
gene list |
[Coexpressed gene list for MCCA]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
263118_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
263118_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
263118_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G03090 Gene
