[←][→] ath   At1g03090 Gene
functional annotation
Function   methylcrotonyl-CoA carboxylase alpha chain    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006552 [list] [network] leucine catabolic process  (6 genes)  IDA IEA  
GO CC
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO MF
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity  (1 genes)  IDA  
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
KEGG ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes)
Protein NP_563674.1  NP_849583.1 
BLAST NP_563674.1  NP_849583.1 
Orthologous [Ortholog page] LOC543993 (sly)  MCCA (gma)  LOC4352741 (osa)  LOC7464698 (ppo)  LOC11431272 (mtr)  LOC100804850 (gma)  LOC103843706 (bra)  LOC123102270 (tae)  LOC123119456 (tae)  LOC123395941 (hvu) 
Subcellular
localization
wolf
mito 9,  chlo 1  (predict for NP_563674.1)
mito 9,  chlo 1  (predict for NP_849583.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_563674.1)
mito 8  (predict for NP_849583.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath00640 Propanoate metabolism 3
ath00250 Alanine, aspartate and glutamate metabolism 3
ath01200 Carbon metabolism 2
ath00910 Nitrogen metabolism 2
Genes directly connected with MCCA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.6 BCE2 2-oxoacid dehydrogenases acyltransferase family protein [detail] 819869
13.9 ETFQO electron-transfer flavoprotein:ubiquinone oxidoreductase [detail] 818941
13.0 DIN4 Transketolase family protein [detail] 820547
12.7 MCCB 3-methylcrotonyl-CoA carboxylase [detail] 829549
11.9 IVD isovaleryl-CoA-dehydrogenase [detail] 823668
10.7 AT1G18270 ketose-bisphosphate aldolase class-II family protein [detail] 838407
10.7 SEN1 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 829730
10.3 ALDH6B2 aldehyde dehydrogenase 6B2 [detail] 815903
9.7 ACBP3 acyl-CoA-binding domain 3 [detail] 828524
9.3 AKINBETA1 5'-AMP-activated protein kinase beta-2 subunit protein [detail] 832243
9.1 ASN1 glutamine-dependent asparagine synthase 1 [detail] 823888
9.0 AT2G31810 ACT domain-containing small subunit of acetolactate synthase protein [detail] 817738
7.5 UKL3 uridine kinase-like 3 [detail] 842031
7.5 WRI4 Integrase-type DNA-binding superfamily protein [detail] 844309
6.4 AT3G48390 MA3 domain-containing protein [detail] 823997
6.3 BCA6 beta carbonic anhydrase 6 [detail] 842185
5.9 AT5G14470 GHMP kinase family protein [detail] 831298
5.4 AGT3 alanine:glyoxylate aminotransferase 3 [detail] 818421
5.4 ATTPS6 UDP-Glycosyltransferase / trehalose-phosphatase family protein [detail] 843130
5.3 GDH1 glutamate dehydrogenase 1 [detail] 831935
4.5 AT2G14160 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 815902
Coexpressed
gene list		 [Coexpressed gene list for MCCA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263118_at
263118_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263118_at
263118_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263118_at
263118_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838362      
Refseq ID (protein) NP_563674.1 
NP_849583.1 


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