[←][→] ath   AT1G03475 Gene
functional annotation
Function   Coproporphyrinogen III oxidase  
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (15 genes)  IBA IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (41 genes)  IEA  
GO:0033014 [list] [network] tetrapyrrole biosynthetic process  (52 genes)  IC  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004109 [list] [network] coproporphyrinogen oxidase activity  (3 genes)  IBA IGI  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_171847.4 
BLAST NP_171847.4 
Orthologous [Ortholog page] LOC4336951 (osa)  LOC11425298 (mtr)  LOC100243271 (vvi)  LOC100500945 (zma)  CPX (gma)  LOC101260673 (sly)  LOC103843696 (bra)  LOC103844502 (bra) 
Subcellular
localization
wolf
chlo 9,  mito 1,  pero 1  (predict for NP_171847.4)
Subcellular
localization
TargetP
chlo 9  (predict for NP_171847.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin and chlorophyll metabolism 9
ath03010 Ribosome 4
Genes directly connected with LIN2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.3 HEMC hydroxymethylbilane synthase [detail] 830724
9.3 PSRP2 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824379
9.0 HEMB1 Aldolase superfamily protein [detail] 843310
7.9 GSA1 glutamate-1-semialdehyde-2,1-aminomutase [detail] 836476
6.2 DHS2 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase [detail] 829489
Coexpressed
gene list		 [Coexpressed gene list for LIN2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264820_at
264820_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264820_at
264820_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264820_at
264820_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839489      
Refseq ID (protein) NP_171847.4 


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