[][] ath   AT1G03790 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein
GO BP
GO:0010187 [list] [network] negative regulation of seed germination  (23 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_171875.1 
BLAST NP_171875.1 
Orthologous [Ortholog page] AT5G44260 (ath)LOC11438176 (mtr)LOC25487687 (mtr)LOC100257395 (vvi)LOC100787049 (gma)LOC100800123 (gma)LOC100801371 (gma)LOC100820375 (gma)LOC101249100 (sly)LOC103827917 (bra)LOC103836605 (bra)LOC103839193 (bra)LOC103844316 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_171875.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for NP_171875.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SOM on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.0 NADP-ME1 NADP-malic enzyme 1 [detail] 816509
6.7 LEA18 Late embryogenesis abundant protein, group 1 protein [detail] 818097
6.6 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily protein [detail] 825014
5.8 HAI3 highly ABA-induced PP2C protein 3 [detail] 817487
Coexpressed
gene list
[Coexpressed gene list for SOM]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265084_at
265084_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265084_at
265084_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
265084_at
265084_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839408    
Refseq ID (protein) NP_171875.1 


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