[←][→] ath   AT1G04020 Gene
functional annotation
Function   breast cancer associated RING 1  
GO BP
GO:0009934 [list] [network] regulation of meristem structural organization  (21 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_001318917.1  NP_973758.2 
BLAST NP_001318917.1  NP_973758.2 
Orthologous [Ortholog page] LOC4336384 (osa)  LOC7474513 (ppo)  LOC11444771 (mtr)  LOC100253255 (vvi)  LOC100281664 (zma)  LOC100306420 (gma)  LOC100784883 (gma)  LOC101249153 (sly)  LOC101256776 (sly)  LOC101264126 (sly)  LOC103843674 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001318917.1)
nucl 10  (predict for NP_973758.2)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for NP_001318917.1)
other 4,  scret 3  (predict for NP_973758.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 3
Genes directly connected with BARD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.7 RPA70D Replication factor-A protein 1-like protein [detail] 836221
18.6 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
18.5 RPA70B RPA70-kDa subunit B [detail] 830696
15.4 AT3G27640 Transducin/WD40 repeat-like superfamily protein [detail] 822386
14.9 SYN3 Rad21/Rec8-like family protein [detail] 825124
13.5 CYCA3;1 Cyclin A3;1 [detail] 834324
13.2 TSK tetratricopeptide repeat (TPR)-containing protein [detail] 821404
13.2 MSH7 MUTS homolog 7 [detail] 822040
12.4 SDG4 SET domain group 4 [detail] 829210
11.9 AT3G54750 downstream neighbor of Son [detail] 824640
8.9 MAP65-5 microtubule-associated protein 65-5 [detail] 818454
Coexpressed
gene list		 [Coexpressed gene list for BARD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265097_at
265097_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265097_at
265097_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265097_at
265097_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839329      
Refseq ID (protein) NP_001318917.1 
NP_973758.2 


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