ATTED-II : GeneID search result

[←][→] ath At1g04530 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO:0009637 [list] [network] response to blue light	(160 genes)	IEA
GO:0010629 [list] [network] negative regulation of gene expression	(396 genes)	IEA
GO:0006396 [list] [network] RNA processing	(567 genes)	IEA
GO:0044248 [list] [network] cellular catabolic process	(1086 genes)	IEA
GO:1901575 [list] [network] organic substance catabolic process	(1156 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region	(3154 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

KEGG

Protein

NP_563709.1

BLAST

NP_563709.1

Orthologous

[Ortholog page] LOC7494753 (ppo) LOC11424438 (mtr) LOC100783167 (gma) LOC100805375 (gma) LOC101245498 (sly) LOC101265510 (sly) LOC103844246 (bra)

Subcellular
localization
wolf

cysk 5, nucl 2, plas 1, cyto_nucl 1

(predict for NP_563709.1)

Subcellular
localization
TargetP

other 8

(predict for NP_563709.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with TPR4 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.0	AT1G66330	senescence-associated family protein	[detail]	842950
6.4	ftsh9	FTSH protease 9	[detail]	836004
5.8	AT1G55960	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[detail]	842047

Coexpressed
gene list

[Coexpressed gene list for TPR4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264609_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264609_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264609_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839500
Refseq ID (protein)	NP_563709.1

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