[←][→] ath   AT1G04950 Gene
functional annotation
Function   TATA BOX ASSOCIATED FACTOR II 59  
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (9 genes)  IBA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  IBA  
GO:0009860 [list] [network] pollen tube growth  (129 genes)  IMP  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IEA  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IBA  
GO CC
GO:0046695 [list] [network] SLIK (SAGA-like) complex  (3 genes)  IEA  
GO:0000124 [list] [network] SAGA complex  (12 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (19 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IEA  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001030969.1  NP_171987.1  NP_849592.1 
BLAST NP_001030969.1  NP_171987.1  NP_849592.1 
Orthologous [Ortholog page] LOC4324027 (osa)  LOC7487521 (ppo)  LOC11432982 (mtr)  LOC11443540 (mtr)  LOC25497722 (mtr)  LOC100217288 (zma)  LOC100263756 (vvi)  LOC100265835 (vvi)  LOC100783444 (gma)  LOC100788777 (gma)  LOC100799998 (gma)  LOC101253325 (sly)  LOC101264035 (sly)  LOC103836545 (bra)  LOC103844197 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001030969.1)
cyto 6,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_171987.1)
cyto 6,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_849592.1)
Subcellular
localization
TargetP
other 5,  scret 5  (predict for NP_001030969.1)
other 5,  scret 5  (predict for NP_171987.1)
other 5,  scret 5  (predict for NP_849592.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TAFII59 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 emb1427 Spc97 / Spc98 family of spindle pole body (SBP) component [detail] 844366
6.4 AT5G51150 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [detail] 835189
6.0 MED6 RNA polymerase transcriptional regulation mediator-like protein [detail] 821689
5.4 AT5G59830 DNA-binding protein [detail] 836104
5.0 AT3G56750 plant/protein [detail] 824842
4.8 AT1G77480 Eukaryotic aspartyl protease family protein [detail] 844084
4.6 AT1G09710 Homeodomain-like superfamily protein [detail] 837499
Coexpressed
gene list		 [Coexpressed gene list for TAFII59]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261126_at
261126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261126_at
261126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261126_at
261126_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839370      
Refseq ID (protein) NP_001030969.1 
NP_171987.1 
NP_849592.1 


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