ATTED-II : GeneID search result

[←][→] ath AT1G05710 Gene

functional annotation

Function

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific	(36 genes)	IBA
GO:0046983 [list] [network] protein dimerization activity	(570 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001184916.1 NP_001322940.1 NP_001322941.1 NP_001322942.1 NP_001322943.1 NP_001322944.1 NP_001322945.1 NP_001322946.1 NP_001322947.1 NP_001322948.1 NP_563746.1 NP_849597.1 NP_973764.1 NP_973765.1

BLAST

NP_001184916.1 NP_001322940.1 NP_001322941.1 NP_001322942.1 NP_001322943.1 NP_001322944.1 NP_001322945.1 NP_001322946.1 NP_001322947.1 NP_001322948.1 NP_563746.1 NP_849597.1 NP_973764.1 NP_973765.1

Orthologous

[Ortholog page] LOC543581 (sly) AT2G31730 (ath) LOC4334181 (osa) LOC4336261 (osa) LOC7498099 (ppo) LOC11444608 (mtr) LOC100193902 (zma) LOC100194340 (zma) LOC100243890 (vvi) LOC100274252 (zma) LOC100527660 (gma) LOC100809747 (gma) LOC103836515 (bra) LOC103844099 (bra) LOC103857396 (bra) LOC103867701 (bra)

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_001184916.1)
nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for NP_001322940.1)
nucl 9, cyto_nucl 5	(predict for NP_001322941.1)
nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for NP_001322942.1)
nucl 9, cyto_nucl 5	(predict for NP_001322943.1)
nucl 9, cyto_nucl 5	(predict for NP_001322944.1)
nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for NP_001322945.1)
nucl 8, chlo 1, plas 1, extr 1	(predict for NP_001322946.1)
nucl 8, chlo 1, plas 1, extr 1	(predict for NP_001322947.1)
nucl 8, mito 1, plas 1, vacu 1, mito_plas 1	(predict for NP_001322948.1)
nucl 9, cyto_nucl 5	(predict for NP_563746.1)
nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for NP_849597.1)
nucl 9, cyto_nucl 5	(predict for NP_973764.1)
nucl 9, cyto_nucl 5	(predict for NP_973765.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001184916.1)
other 7	(predict for NP_001322940.1)
other 7	(predict for NP_001322941.1)
other 7	(predict for NP_001322942.1)
other 7	(predict for NP_001322943.1)
other 7	(predict for NP_001322944.1)
other 7	(predict for NP_001322945.1)
other 8	(predict for NP_001322946.1)
other 8	(predict for NP_001322947.1)
other 7	(predict for NP_001322948.1)
other 7	(predict for NP_563746.1)
other 7	(predict for NP_849597.1)
other 7	(predict for NP_973764.1)
other 7	(predict for NP_973765.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

Genes directly connected with AT1G05710 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.4	AT2G31730	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[detail]	817730
4.1	GASA5	GAST1 protein homolog 5	[detail]	821194
4.0	WRKY39	WRKY DNA-binding protein 39	[detail]	819625

Coexpressed
gene list

[Coexpressed gene list for AT1G05710]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263179_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263179_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263179_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837078
Refseq ID (protein)	NP_001184916.1
	NP_001322940.1
	NP_001322941.1
	NP_001322942.1
	NP_001322943.1
	NP_001322944.1
	NP_001322945.1
	NP_001322946.1
	NP_001322947.1
	NP_001322948.1
	NP_563746.1
	NP_849597.1
	NP_973764.1
	NP_973765.1

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