[←][→] ath   At1g05850 Gene
functional annotation
Function   Chitinase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006032 [list] [network] chitin catabolic process  (8 genes)  IEA  
GO:0010337 [list] [network] regulation of salicylic acid metabolic process  (15 genes)  IMP  
GO:0016998 [list] [network] cell wall macromolecule catabolic process  (25 genes)  IEA  
GO:0010167 [list] [network] response to nitrate  (30 genes)  IMP  
GO:0001708 [list] [network] cell fate specification  (34 genes)  IMP  
GO:0030244 [list] [network] cellulose biosynthetic process  (40 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (42 genes)  IMP  
GO:0009809 [list] [network] lignin biosynthetic process  (43 genes)  IGI  
GO:0043255 [list] [network] regulation of carbohydrate biosynthetic process  (59 genes)  IGI  
GO:0009735 [list] [network] response to cytokinin  (123 genes)  IMP  
GO:0010053 [list] [network] root epidermal cell differentiation  (172 genes)  IMP  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004568 [list] [network] chitinase activity  (6 genes)  IDA  
GO:0030247 [list] [network] polysaccharide binding  (94 genes)  IDA  
KEGG
Protein NP_001321426.1  NP_172076.1 
BLAST NP_001321426.1  NP_172076.1 
Orthologous [Ortholog page] CTL2 (ath)  LOC4346079 (osa)  LOC4347451 (osa)  LOC7462014 (ppo)  LOC7482264 (ppo)  LOC11417123 (mtr)  LOC11446816 (mtr)  LOC25485250 (mtr)  LOC100805300 (gma)  LOC100808683 (gma)  LOC100809617 (gma)  LOC100811072 (gma)  LOC101252859 (sly)  LOC101254426 (sly)  LOC103836508 (bra)  LOC103844092 (bra)  LOC123104220 (tae)  LOC123112469 (tae)  LOC123121979 (tae)  LOC123165361 (tae)  LOC123399514 (hvu) 
Subcellular
localization
wolf
extr 5,  chlo 4,  vacu 1  (predict for NP_001321426.1)
extr 5,  chlo 4,  vacu 1  (predict for NP_172076.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001321426.1)
scret 9  (predict for NP_172076.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with POM1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.5 GH9A1 glycosyl hydrolase 9A1 [detail] 835035
11.8 COB COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family [detail] 836213
10.5 GH9B7 glycosyl hydrolase 9B7 [detail] 843902
8.0 AT2G32580 transmembrane protein, putative (DUF1068) [detail] 817818
7.7 PIP1;5 plasma membrane intrinsic protein 1;5 [detail] 828439
6.7 SETH3 Sugar isomerase (SIS) family protein [detail] 824634
6.5 AT1G76020 Thioredoxin superfamily protein [detail] 843933
5.4 GAD2 glutamate decarboxylase 2 [detail] 842908
Coexpressed
gene list		 [Coexpressed gene list for POM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261279_at
261279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261279_at
261279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261279_at
261279_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837095      
Refseq ID (protein) NP_001321426.1 
NP_172076.1 


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