[←][→] ath   At1g06620 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (147 genes)  IEA  
GO:0042430 [list] [network] indole-containing compound metabolic process  (170 genes)  IEA  
GO:1901605 [list] [network] alpha-amino acid metabolic process  (278 genes)  IEA  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IEA  
GO:1901135 [list] [network] carbohydrate derivative metabolic process  (589 genes)  IEA  
GO:0016053 [list] [network] organic acid biosynthetic process  (622 genes)  IEA  
GO:0008610 [list] [network] lipid biosynthetic process  (657 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0044255 [list] [network] cellular lipid metabolic process  (822 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0016706 [list] [network] 2-oxoglutarate-dependent dioxygenase activity  (50 genes)  ISS  
KEGG
Protein NP_001320174.1  NP_172147.2 
BLAST NP_001320174.1  NP_172147.2 
Orthologous [Ortholog page] E8 (sly)  AT2G25450 (ath)  AT2G30830 (ath)  AT2G30840 (ath)  AT3G61400 (ath)  AT5G43440 (ath)  AT5G43450 (ath)  AT5G59530 (ath)  AT5G59540 (ath)  AT1G06640 (ath)  AT1G06650 (ath)  AT1G03400 (ath)  2A6 (ath)  AT1G04380 (ath)  AT1G04350 (ath)  AT1G06645 (ath)  LOC4333774 (osa)  LOC4335099 (osa)  LOC7474620 (ppo)  LOC7476902 (ppo)  LOC7479980 (ppo)  LOC7485152 (ppo)  LOC7487408 (ppo)  LOC7498016 (ppo)  LOC7498017 (ppo)  LOC7498018 (ppo)  LOC11405673 (mtr)  LOC11406189 (mtr)  LOC11408358 (mtr)  LOC11409009 (mtr)  LOC11409250 (mtr)  LOC11409504 (mtr)  LOC11409765 (mtr)  LOC11410509 (mtr)  LOC11410704 (mtr)  LOC11410782 (mtr)  LOC11410784 (mtr)  LOC11413339 (mtr)  LOC11418386 (mtr)  LOC11418387 (mtr)  LOC11419853 (mtr)  LOC11421214 (mtr)  LOC11424282 (mtr)  LOC11429536 (mtr)  LOC11429538 (mtr)  LOC11431109 (mtr)  LOC11434481 (mtr)  LOC11434538 (mtr)  LOC11434967 (mtr)  LOC11438884 (mtr)  LOC18101595 (ppo)  LOC18102482 (ppo)  LOC18106584 (ppo)  LOC18106587 (ppo)  LOC25479840 (mtr)  LOC25483008 (mtr)  LOC25484298 (mtr)  LOC25493597 (mtr)  LOC25494048 (mtr)  LOC25497878 (mtr)  LOC25498293 (mtr)  LOC25498303 (mtr)  LOC25500056 (mtr)  LOC25500804 (mtr)  ODD (sly)  LOC100777564 (gma)  LOC100778953 (gma)  LOC100781078 (gma)  LOC100781624 (gma)  LOC100785833 (gma)  LOC100786255 (gma)  LOC100787331 (gma)  LOC100789941 (gma)  LOC100790198 (gma)  LOC100792296 (gma)  LOC100792753 (gma)  LOC100806682 (gma)  LOC100809768 (gma)  LOC100815823 (gma)  LOC100815890 (gma)  LOC101244528 (sly)  LOC101245098 (sly)  LOC101245399 (sly)  LOC101245697 (sly)  LOC101245991 (sly)  LOC101246865 (sly)  LOC101247162 (sly)  LOC101248415 (sly)  LOC101249199 (sly)  LOC101249481 (sly)  LOC101250009 (sly)  LOC101250295 (sly)  LOC101259580 (sly)  LOC101259885 (sly)  LOC101260178 (sly)  ACO3 (sly)  LOC102659434 (gma)  LOC102659833 (gma)  LOC102667868 (gma)  LOC102668613 (gma)  LOC102669426 (gma)  LOC103836579 (bra)  LOC103841969 (bra)  LOC103843501 (bra)  LOC103843502 (bra)  LOC103843543 (bra)  LOC103843658 (bra)  LOC103844023 (bra)  LOC103844024 (bra)  LOC103844025 (bra)  LOC103844262 (bra)  LOC103844264 (bra)  LOC103844266 (bra)  LOC103844507 (bra)  LOC103844509 (bra)  LOC103856626 (bra)  LOC103856627 (bra)  LOC103856628 (bra)  LOC103856629 (bra)  GSL-OH (bra)  LOC103865075 (bra)  LOC103865076 (bra)  LOC103865077 (bra)  LOC103865078 (bra)  LOC103865081 (bra)  LOC103869588 (bra)  LOC106798825 (gma)  LOC117125692 (bra)  LOC117128368 (bra)  LOC123040041 (tae)  LOC123040049 (tae)  LOC123043181 (tae)  LOC123048248 (tae)  LOC123048250 (tae)  LOC123048251 (tae)  LOC123051068 (tae)  LOC123051075 (tae)  LOC123058656 (tae)  LOC123072301 (tae)  LOC123074846 (tae)  LOC123076530 (tae)  LOC123088671 (tae)  LOC123111152 (tae)  LOC123176144 (tae)  LOC123180396 (tae)  LOC123184283 (tae)  LOC123184284 (tae)  LOC123184287 (tae)  LOC123184291 (tae)  LOC123186187 (tae)  LOC123186994 (tae)  LOC123187000 (tae)  LOC123190830 (tae)  LOC123407181 (hvu)  LOC123408335 (hvu)  LOC123424365 (hvu)  LOC123424367 (hvu)  LOC123424865 (hvu)  LOC123429116 (hvu)  LOC123429118 (hvu)  LOC123440337 (hvu) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  mito 1,  extr 1  (predict for NP_001320174.1)
cyto 7,  chlo 1,  nucl 1,  mito 1,  pero 1,  chlo_mito 1  (predict for NP_172147.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001320174.1)
other 6  (predict for NP_172147.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 3
ath00460 Cyanoamino acid metabolism 2
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with AT1G06620 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.9 AT3G51450 Calcium-dependent phosphotriesterase superfamily protein [detail] 824308
9.2 MEB1 vacuolar iron transporter (VIT) family protein [detail] 828899
7.9 MEB2 Vacuolar iron transporter (VIT) family protein [detail] 832496
7.6 AT3G50280 HXXXD-type acyl-transferase family protein [detail] 824190
7.3 AT1G23850 uncharacterized protein [detail] 838996
6.4 AT2G39420 alpha/beta-Hydrolases superfamily protein [detail] 818527
6.3 MES5 methyl esterase 5 [detail] 830894
6.3 AT1G77420 alpha/beta-Hydrolases superfamily protein [detail] 844079
5.9 AT1G72120 Major facilitator superfamily protein [detail] 843543
5.4 NIT3 nitrilase 3 [detail] 823557
5.3 GCL1 GCR2-like 1 [detail] 836653
4.3 LOX6 PLAT/LH2 domain-containing lipoxygenase family protein [detail] 843077
Coexpressed
gene list		 [Coexpressed gene list for AT1G06620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262616_at
262616_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262616_at
262616_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262616_at
262616_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837171      
Refseq ID (protein) NP_001320174.1 
NP_172147.2 


The preparation time of this page was 0.1 [sec].