[←][→] ath   At1g07350 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (21 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (191 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001323001.1  NP_001323002.1  NP_001323003.1  NP_001323004.1  NP_563787.2  NP_849605.1 
BLAST NP_001323001.1  NP_001323002.1  NP_001323003.1  NP_001323004.1  NP_563787.2  NP_849605.1 
Orthologous [Ortholog page] LOC780661 (tae)  AT4G35785 (ath)  LOC4332350 (osa)  LOC4342102 (osa)  LOC4345455 (osa)  LOC7458189 (ppo)  LOC7468012 (ppo)  LOC7481499 (ppo)  LOC11430997 (mtr)  LOC11440544 (mtr)  LOC18099113 (ppo)  LOC25490768 (mtr)  LOC100499944 (gma)  LOC100527350 (gma)  LOC100798472 (gma)  LOC100800398 (gma)  LOC100802834 (gma)  LOC100805126 (gma)  LOC100808038 (gma)  LOC101246587 (sly)  LOC101255764 (sly)  LOC101261529 (sly)  LOC103834931 (bra)  LOC103835535 (bra)  LOC103843952 (bra)  LOC103873570 (bra)  LOC123085382 (tae)  LOC123090159 (tae)  LOC123149730 (tae)  LOC123149957 (tae)  LOC123156736 (tae)  LOC123164493 (tae)  LOC123165604 (tae)  LOC123407403 (hvu)  LOC123413361 (hvu)  LOC123450642 (hvu) 
Subcellular
localization
wolf
mito 5,  nucl 3,  chlo 2  (predict for NP_001323001.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_001323002.1)
chlo 4,  nucl 2,  cyto 1,  golg 1,  nucl_plas 1  (predict for NP_001323003.1)
chlo 5,  mito 3,  cyto 1,  pero 1,  golg 1,  cyto_pero 1  (predict for NP_001323004.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_563787.2)
mito 5,  nucl 3,  chlo 2  (predict for NP_849605.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for NP_001323001.1)
chlo 4  (predict for NP_001323002.1)
chlo 4  (predict for NP_001323003.1)
chlo 6,  mito 6  (predict for NP_001323004.1)
chlo 4  (predict for NP_563787.2)
chlo 6,  mito 5  (predict for NP_849605.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03040 Spliceosome 3
ath04626 Plant-pathogen interaction 2
Genes directly connected with SR45a on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.6 MBF1C multiprotein bridging factor 1C [detail] 822041
12.7 AT-HSFB2B winged-helix DNA-binding transcription factor family protein [detail] 826771
12.4 AT2G20560 DNAJ heat shock family protein [detail] 816578
10.4 SCL33 SC35-like splicing factor 33 [detail] 841976
8.8 AT2G19310 HSP20-like chaperones superfamily protein [detail] 816448
8.8 AT2G41160 Ubiquitin-associated (UBA) protein [detail] 818715
8.7 SGT1A phosphatase-like protein [detail] 828457
5.2 AT5G18065 target of trans acting-siR480/255 protein [detail] 831535
Coexpressed
gene list		 [Coexpressed gene list for SR45a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261081_at
261081_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261081_at
261081_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261081_at
261081_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837246      
Refseq ID (protein) NP_001323001.1 
NP_001323002.1 
NP_001323003.1 
NP_001323004.1 
NP_563787.2 
NP_849605.1 


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