| functional annotation |
| Function |
DNA polymerase epsilon catalytic subunit |
|
| GO BP |
|
GO:0006287 [list] [network] base-excision repair, gap-filling
|
(2 genes)
|
IBA
|
 |
|
GO:0045004 [list] [network] DNA replication proofreading
|
(2 genes)
|
IBA
|
|
|
GO:0010086 [list] [network] embryonic root morphogenesis
|
(3 genes)
|
IMP
|
|
|
GO:0006297 [list] [network] nucleotide-excision repair, DNA gap filling
|
(4 genes)
|
IBA
|
|
|
GO:0006272 [list] [network] leading strand elongation
|
(5 genes)
|
IBA
|
|
|
GO:0048579 [list] [network] negative regulation of long-day photoperiodism, flowering
|
(12 genes)
|
IMP
|
|
|
GO:0051302 [list] [network] regulation of cell division
|
(60 genes)
|
IMP
|
|
|
GO:0000278 [list] [network] mitotic cell cycle
|
(198 genes)
|
IBA
|
|
|
GO:0009793 [list] [network] embryo development ending in seed dormancy
|
(547 genes)
|
IMP
NAS
|
|
|
| GO CC |
|
| GO MF |
|
GO:0008310 [list] [network] single-stranded DNA 3'-5' exodeoxyribonuclease activity
|
(4 genes)
|
IBA
|
|
|
GO:0003887 [list] [network] DNA-directed DNA polymerase activity
|
(16 genes)
|
IBA
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IBA
|
|
|
| KEGG |
ath03030 [list] [network] DNA replication (50 genes) |
 |
| ath03410 [list] [network] Base excision repair (43 genes) |
|
| ath03420 [list] [network] Nucleotide excision repair (69 genes) |
|
| Protein |
NP_001322767.1
NP_172303.5
|
| BLAST |
NP_001322767.1
NP_172303.5
|
| Orthologous |
[Ortholog page]
TIL2 (ath)
LOC4329458 (osa)
LOC11445193 (mtr)
LOC100241432 (vvi)
LOC100778115 (gma)
LOC100812003 (gma)
LOC101253967 (sly)
LOC103627197 (zma)
LOC103871570 (bra)
|
Subcellular
localization
wolf |
|
nucl 4,
cyto 4,
cyto_nucl 4
|
(predict for NP_001322767.1)
|
|
nucl 4,
cyto 4,
cyto_nucl 4
|
(predict for NP_172303.5)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001322767.1)
|
|
other 8
|
(predict for NP_172303.5)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03030 |
DNA replication |
6 |
 |
| ath03440 |
Homologous recombination |
4 |
 |
| ath03410 |
Base excision repair |
3 |
 |
| ath03420 |
Nucleotide excision repair |
2 |
 |
Genes directly connected with TIL1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 14.5 |
ICU2 |
DNA-directed DNA polymerase |
[detail] |
836845 |
| 10.8 |
BRCA1 |
breast cancer susceptibility1 |
[detail] |
827854 |
| 9.6 |
RNR1 |
ribonucleotide reductase 1 |
[detail] |
816715 |
| 9.3 |
MIM |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
836267 |
| 8.7 |
ATX1 |
homologue of trithorax |
[detail] |
817721 |
| 8.6 |
ORC4 |
origin recognition complex subunit 4 |
[detail] |
814641 |
| 8.6 |
AT5G63960 |
DNA polymerase delta subunit 1 |
[detail] |
836517 |
| 7.8 |
ESP |
separase |
[detail] |
828396 |
| 6.9 |
PARP1 |
poly(ADP-ribose) polymerase 2 |
[detail] |
817690 |
| 6.1 |
SRS2 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
828615 |
|
Coexpressed
gene list |
[Coexpressed gene list for TIL1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
261811_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
261811_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
261811_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G08260 Gene
