[←][→] ath   At1g10560 Gene
functional annotation
Function   plant U-box 18    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IGI  
GO:0010119 [list] [network] regulation of stomatal movement  (105 genes)  IMP  
GO:0009787 [list] [network] regulation of abscisic acid-activated signaling pathway  (134 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IMP  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_172526.1 
BLAST NP_172526.1 
Orthologous [Ortholog page] PUB19 (ath)  LOC4345574 (osa)  LOC4346922 (osa)  LOC7457723 (ppo)  LOC7458028 (ppo)  LOC11406349 (mtr)  LOC11446555 (mtr)  LOC25489542 (mtr)  LOC100787869 (gma)  LOC100795816 (gma)  LOC100810963 (gma)  LOC101249360 (sly)  LOC101249811 (sly)  LOC103829733 (bra)  LOC103871832 (bra)  LOC123046829 (tae)  LOC123050139 (tae)  LOC123103637 (tae)  LOC123116128 (tae)  LOC123121415 (tae)  LOC123186188 (tae)  LOC123395831 (hvu)  LOC123430895 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 2,  cysk_nucl 1,  mito 1  (predict for NP_172526.1)
Subcellular
localization
TargetP
other 5  (predict for NP_172526.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB18 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 PUB19 ARM repeat superfamily protein [detail] 842314
5.3 AT2G28400 senescence regulator (Protein of unknown function, DUF584) [detail] 817388
5.0 ERF4 ethylene responsive element binding factor 4 [detail] 820752
Coexpressed
gene list		 [Coexpressed gene list for PUB18]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263259_at
263259_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263259_at
263259_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263259_at
263259_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837597      
Refseq ID (protein) NP_172526.1 


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