[←][→] ath   AT1G11860 Gene
functional annotation
Function   Glycine cleavage T-protein family  
GO BP
GO:0019464 [list] [network] glycine decarboxylation via glycine cleavage system  (6 genes)  IBA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA IBA IDA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0004047 [list] [network] aminomethyltransferase activity  (1 genes)  IBA  
GO:0008483 [list] [network] transaminase activity  (64 genes)  IEA  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00670 [list] [network] One carbon pool by folate (20 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_001318983.1  NP_172650.1  NP_849646.1 
BLAST NP_001318983.1  NP_172650.1  NP_849646.1 
Orthologous [Ortholog page] LOC4337051 (osa)  LOC11437303 (mtr)  LOC100250401 (vvi)  LOC100279332 (zma)  LOC100778188 (gma)  LOC100800509 (gma)  LOC100809241 (gma)  LOC101249137 (sly)  LOC103836204 (bra)  LOC103843220 (bra) 
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_001318983.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_172650.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_849646.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001318983.1)
mito 8  (predict for NP_172650.1)
mito 8  (predict for NP_849646.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00630 Glyoxylate and dicarboxylate metabolism 7
ath01230 Biosynthesis of amino acids 6
ath00260 Glycine, serine and threonine metabolism 5
ath00010 Glycolysis / Gluconeogenesis 4
Genes directly connected with AT1G11860 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 PGK1 phosphoglycerate kinase 1 [detail] 820461
8.5 BOU Mitochondrial substrate carrier family protein [detail] 834724
8.4 GS2 glutamine synthetase 2 [detail] 833535
8.0 mtLPD1 mitochondrial lipoamide dehydrogenase 1 [detail] 841221
7.8 GLDP1 glycine decarboxylase P-protein 1 [detail] 829438
7.6 ACR11 uridylyltransferase-like protein [detail] 838259
6.4 FTSZ2-2 Tubulin/FtsZ family protein [detail] 824441
6.4 AKR2 ankyrin repeat-containing protein 2 [detail] 829697
Coexpressed
gene list		 [Coexpressed gene list for AT1G11860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264394_at
264394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264394_at
264394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264394_at
264394_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837733      
Refseq ID (protein) NP_001318983.1 
NP_172650.1 
NP_849646.1 


The preparation time of this page was 0.2 [sec].