[←][→] ath   At1g11860 Gene
functional annotation
Function   Glycine cleavage T-protein family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00670 [list] [network] One carbon pool by folate (21 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_001318983.1  NP_172650.1  NP_849646.1 
BLAST NP_001318983.1  NP_172650.1  NP_849646.1 
Orthologous [Ortholog page] LOC4337051 (osa)  LOC11437303 (mtr)  LOC18097363 (ppo)  LOC18111215 (ppo)  LOC100778188 (gma)  LOC100800509 (gma)  LOC100804288 (gma)  LOC100809241 (gma)  LOC101249137 (sly)  LOC103836204 (bra)  LOC103843220 (bra)  LOC123054633 (tae)  LOC123427785 (hvu) 
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_001318983.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_172650.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_849646.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001318983.1)
mito 8  (predict for NP_172650.1)
mito 8  (predict for NP_849646.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath01230 Biosynthesis of amino acids 6
ath00260 Glycine, serine and threonine metabolism 5
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 5
Genes directly connected with AT1G11860 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.9 PGK1 phosphoglycerate kinase 1 [detail] 820461
8.9 BOU Mitochondrial substrate carrier family protein [detail] 834724
8.6 mtLPD1 mitochondrial lipoamide dehydrogenase 1 [detail] 841221
8.5 GLDP1 glycine decarboxylase P-protein 1 [detail] 829438
8.1 FTSZ2-2 Tubulin/FtsZ family protein [detail] 824441
7.9 ACR11 uridylyltransferase-like protein [detail] 838259
7.7 EMB3119 Ribose 5-phosphate isomerase, type A protein [detail] 819639
6.2 AKR2 ankyrin repeat-containing protein 2 [detail] 829697
Coexpressed
gene list		 [Coexpressed gene list for AT1G11860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264394_at
264394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264394_at
264394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264394_at
264394_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837733      
Refseq ID (protein) NP_001318983.1 
NP_172650.1 
NP_849646.1 


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