[←][→] ath   At1g12250 Gene
functional annotation
Function   Pentapeptide repeat-containing protein      
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
KEGG
Protein NP_001077523.1  NP_001321169.1  NP_563902.1 
BLAST NP_001077523.1  NP_001321169.1  NP_563902.1 
Orthologous [Ortholog page] LOC4330131 (osa)  LOC7479217 (ppo)  LOC11443119 (mtr)  LOC100805220 (gma)  LOC101246554 (sly)  LOC103843144 (bra)  LOC123127850 (tae)  LOC123137789 (tae)  LOC123144947 (tae)  LOC123402257 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1  (predict for NP_001077523.1)
chlo 4,  nucl 3,  nucl_plas 2,  plas 1,  mito 1,  pero 1  (predict for NP_001321169.1)
chlo 10  (predict for NP_563902.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001077523.1)
other 8  (predict for NP_001321169.1)
chlo 9  (predict for NP_563902.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G12250 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.9 AT3G19800 E3 ubiquitin-protein ligase, putative (DUF177) [detail] 821517
8.5 PPD6 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 824832
7.3 AT1G65230 transmembrane protein, putative (DUF2358) [detail] 842830
Coexpressed
gene list		 [Coexpressed gene list for AT1G12250]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260968_at
260968_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260968_at
260968_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260968_at
260968_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837778      
Refseq ID (protein) NP_001077523.1 
NP_001321169.1 
NP_563902.1 


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