[←][→] ath   AT1G13220 Gene
functional annotation
Function   nuclear matrix constituent protein-like protein  
GO BP
GO:0097298 [list] [network] regulation of nucleus size  (3 genes)  IMP  
GO:0006997 [list] [network] nucleus organization  (58 genes)  IGI IMP  
GO:0006974 [list] [network] cellular response to DNA damage stimulus  (329 genes)  IGI  
GO CC
GO:0005652 [list] [network] nuclear lamina  (4 genes)  IEA  
GO:0034399 [list] [network] nuclear periphery  (19 genes)  IDA  
GO:0031965 [list] [network] nuclear membrane  (42 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA ISM  
GO MF
KEGG
Protein NP_001322783.1  NP_563923.1  NP_563924.1 
BLAST NP_001322783.1  NP_563923.1  NP_563924.1 
Orthologous [Ortholog page] LINC1 (ath)  LINC3 (ath)  LOC4330487 (osa)  LOC25497658 (mtr)  LOC100242259 (vvi)  LOC100248029 (vvi)  LOC100802673 (gma)  LOC100803601 (gma)  LOC100805888 (gma)  LOC100816589 (gma)  LOC101255471 (sly)  LOC101264275 (sly)  LOC103653975 (zma)  LOC103831155 (bra)  LOC103852383 (bra)  LOC103852523 (bra)  LOC103871951 (bra)  LOC113001403 (gma) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001322783.1)
chlo 6,  nucl 1,  extr 1,  vacu 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_563923.1)
nucl 7,  cyto 3  (predict for NP_563924.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001322783.1)
mito 5  (predict for NP_563923.1)
other 6  (predict for NP_563924.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with LINC2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.2 NUA nuclear pore anchor [detail] 844268
9.0 AT3G62900 CW-type Zinc Finger [detail] 825465
8.9 AT1G15940 Tudor/PWWP/MBT superfamily protein [detail] 838164
4.9 RECQL2 RECQ helicase L2 [detail] 840026
Coexpressed
gene list		 [Coexpressed gene list for LINC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262773_at
262773_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262773_at
262773_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262773_at
262773_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837882      
Refseq ID (protein) NP_001322783.1 
NP_563923.1 
NP_563924.1 


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