[][] ath   At1g13440 Gene
functional annotation
Function   glyceraldehyde-3-phosphate dehydrogenase C2 Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0006094 [list] [network] gluconeogenesis  (10 genes)  TAS  
GO:0006096 [list] [network] glycolytic process  (28 genes)  TAS  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IMP  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (311 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA TAS  
GO:0005576 [list] [network] extracellular region  (3154 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
= more 7 terms =
GO MF
GO:0004365 [list] [network] glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity  (5 genes)  IDA  
GO:1901149 [list] [network] salicylic acid binding  (28 genes)  HDA  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001077530.1  NP_172801.1 
BLAST NP_001077530.1  NP_172801.1 
Orthologous [Ortholog page] LOC543418 (tae)GAPDH (gma)GAPC1 (ath)LOC4329892 (osa)LOC4336216 (osa)LOC4344564 (osa)LOC7454689 (ppo)LOC7460038 (ppo)LOC7467691 (ppo)LOC7480933 (ppo)LOC7484457 (ppo)LOC11407960 (mtr)LOC11441068 (mtr)LOC25495698 (mtr)GAPC1 (gma)LOC100125727 (tae)LOC100415882 (tae)GAPDH (sly)LOC100781161 (gma)LOC100782924 (gma)LOC100783902 (gma)LOC100794095 (gma)LOC100807342 (gma)LOC100810217 (gma)LOC101249641 (sly)LOC101255800 (sly)GAPC2 (sly)LOC103836104 (bra)LOC103843050 (bra)LOC103848938 (bra)LOC103850055 (bra)LOC103872054 (bra)LOC123163161 (tae)LOC123164327 (tae)LOC123406314 (hvu)LOC123413551 (hvu)
Subcellular
localization
wolf
cyto 10  (predict for NP_001077530.1)
cyto 10  (predict for NP_172801.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001077530.1)
other 6,  mito 3  (predict for NP_172801.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00010 Glycolysis / Gluconeogenesis 6
ath01230 Biosynthesis of amino acids 5
ath00710 Carbon fixation in photosynthetic organisms 3
ath00500 Starch and sucrose metabolism 3
Genes directly connected with GAPC2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 TPI triosephosphate isomerase [detail] 824710
9.1 AT5G08570 Pyruvate kinase family protein [detail] 830758
8.4 c-NAD-MDH1 Lactate/malate dehydrogenase family protein [detail] 839527
5.4 CYP51G1 CYTOCHROME P450 51G1 [detail] 837712
5.2 ATB2 NAD(P)-linked oxidoreductase superfamily protein [detail] 842365
4.1 AT3G57030 Calcium-dependent phosphotriesterase superfamily protein [detail] 824870
Coexpressed
gene list
[Coexpressed gene list for GAPC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259361_at
259361_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259361_at
259361_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
259361_at
259361_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 837904    
Refseq ID (protein) NP_001077530.1 
NP_172801.1 


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