[←][→] ath   At1g13460 Gene
functional annotation
Function   Protein phosphatase 2A regulatory B subunit family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0032000 [list] [network] positive regulation of fatty acid beta-oxidation  (2 genes)  IMP  
GO:1900458 [list] [network] negative regulation of brassinosteroid mediated signaling pathway  (7 genes)  IDA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (15 genes)  IEA  
GO:0005777 [list] [network] peroxisome  (311 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (32 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_172803.1  NP_973816.1 
BLAST NP_172803.1  NP_973816.1 
Orthologous [Ortholog page] AT3G21650 (ath)  ATB' GAMMA (ath)  LOC4334757 (osa)  LOC4336207 (osa)  LOC4342912 (osa)  LOC4344549 (osa)  LOC7458293 (ppo)  LOC7477048 (ppo)  LOC7477049 (ppo)  LOC7480937 (ppo)  LOC7496643 (ppo)  LOC11432697 (mtr)  LOC11446412 (mtr)  LOC18101636 (ppo)  LOC18105339 (ppo)  LOC25495704 (mtr)  LOC100775767 (gma)  LOC100785874 (gma)  LOC100795156 (gma)  LOC100797758 (gma)  LOC100807697 (gma)  LOC100811438 (gma)  LOC100814863 (gma)  LOC101246839 (sly)  LOC101250942 (sly)  LOC101251646 (sly)  LOC101257170 (sly)  LOC103854390 (bra)  LOC103869158 (bra)  LOC103870944 (bra)  LOC103872058 (bra)  LOC103875329 (bra)  LOC117133021 (bra)  LOC123045803 (tae)  LOC123053680 (tae)  LOC123087656 (tae)  LOC123114282 (tae)  LOC123123764 (tae)  LOC123147497 (tae)  LOC123156306 (tae)  LOC123164606 (tae)  LOC123189570 (tae)  LOC123395059 (hvu)  LOC123407227 (hvu)  LOC123427048 (hvu) 
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_mito 2,  cyto_plas 2  (predict for NP_172803.1)
cyto 4,  mito 3,  cyto_mito 2,  cyto_plas 2  (predict for NP_973816.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_172803.1)
chlo 8,  mito 3  (predict for NP_973816.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
Genes directly connected with AT1G13460 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 AT3G20620 F-box family protein-like protein [detail] 821609
6.6 PP2A serine/threonine protein phosphatase 2A [detail] 843333
6.6 AT5G46560 Man1-Src1p-carboxy-terminal domain protein [detail] 834699
6.1 AT5G18940 Mo25 family protein [detail] 832012
6.0 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein [detail] 841466
5.4 AT5G25360 uncharacterized protein [detail] 832608
5.3 AT4G39870 TLD-domain containing nucleolar protein [detail] 830146
5.0 TRM18 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [detail] 6241019
4.9 PDV1 plastid division1 [detail] 835409
4.8 AT4G03475 [detail] 28719494
4.5 AT3G44820 Phototropic-responsive NPH3 family protein [detail] 823616
Coexpressed
gene list		 [Coexpressed gene list for AT1G13460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259359_at
259359_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259359_at
259359_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259359_at
259359_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837906      
Refseq ID (protein) NP_172803.1 
NP_973816.1 


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