ATTED-II : GeneID search result

[←][→] ath AT1G13990 Gene

functional annotation

Function

plant/protein

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

ISM

GO MF

KEGG

Protein

NP_001154334.1 NP_001154335.1 NP_563935.1

BLAST

NP_001154334.1 NP_001154335.1 NP_563935.1

Orthologous

[Ortholog page] LOC4331752 (osa) LOC11427768 (mtr) LOC100264328 (vvi) LOC100789464 (gma) LOC100789803 (gma) LOC103639540 (zma) LOC103872092 (bra) LOC104644345 (sly)

Subcellular
localization
wolf

chlo 8, chlo_mito 6, mito 2	(predict for NP_001154334.1)
chlo 6, chlo_mito 4, mito 2	(predict for NP_001154335.1)
chlo 9, chlo_mito 5	(predict for NP_563935.1)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001154334.1)
chlo 9	(predict for NP_001154335.1)
chlo 9	(predict for NP_563935.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00860	Porphyrin and chlorophyll metabolism	2

Genes directly connected with AT1G13990 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.5	ERD1	Clp ATPase	[detail]	835180
8.2	PPH	pheophytinase	[detail]	831225
7.6	AT5G47860	Gut esterase (DUF1350)	[detail]	834837
6.6	AT5G27280	Zim17-type zinc finger protein	[detail]	832786
6.2	CYP89A9	cytochrome P450, family 87, subfamily A, polypeptide 9	[detail]	821250

Coexpressed
gene list

[Coexpressed gene list for AT1G13990]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262607_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262607_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262607_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837959
Refseq ID (protein)	NP_001154334.1
	NP_001154335.1
	NP_563935.1

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