[←][→] ath   At1g14290 Gene
functional annotation
Function   sphingoid base hydroxylase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0046520 [list] [network] sphingoid biosynthetic process  (3 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  IMP  
GO:0008610 [list] [network] lipid biosynthetic process  (657 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO MF
GO:0000170 [list] [network] sphingosine hydroxylase activity  (2 genes)  IGI  
KEGG ath00600 [list] [network] Sphingolipid metabolism (32 genes)
Protein NP_001320936.1  NP_563944.1 
BLAST NP_001320936.1  NP_563944.1 
Orthologous [Ortholog page] SBH1 (ath)  LOC4330718 (osa)  LOC4340921 (osa)  LOC9268279 (osa)  LOC11420110 (mtr)  LOC100778076 (gma)  LOC100796655 (gma)  LOC101248229 (sly)  LOC101265235 (sly)  LOC103831367 (bra)  LOC103852599 (bra)  LOC103872122 (bra)  LOC123082947 (tae)  LOC123082952 (tae)  LOC123128378 (tae)  LOC123145493 (tae)  LOC123150885 (tae)  LOC123154624 (tae)  LOC123160354 (tae)  LOC123164209 (tae)  LOC123403090 (hvu)  LOC123410636 (hvu) 
Subcellular
localization
wolf
extr 3,  cyto 2,  cyto_E.R. 2,  chlo 1,  E.R. 1,  chlo_mito 1  (predict for NP_001320936.1)
extr 3,  chlo 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_563944.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_001320936.1)
scret 9  (predict for NP_563944.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with SBH2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 FAH2 fatty acid hydroxylase 2 [detail] 827835
6.1 SETH3 Sugar isomerase (SIS) family protein [detail] 824634
5.9 SLD1 Fatty acid/sphingolipid desaturase [detail] 825331
5.6 AT3G27770 plant/protein [detail] 822398
Coexpressed
gene list		 [Coexpressed gene list for SBH2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261492_at
261492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261492_at
261492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261492_at
261492_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837990      
Refseq ID (protein) NP_001320936.1 
NP_563944.1 


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