[←][→] ath   At1g15220 Gene
functional annotation
Function   cytochrome c biogenesis protein family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0017004 [list] [network] cytochrome complex assembly  (22 genes)  TAS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005743 [list] [network] mitochondrial inner membrane  (139 genes)  IDA  
GO:0032991 [list] [network] protein-containing complex  (1500 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA ISM  
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (963 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_563966.1  NP_973834.1 
BLAST NP_563966.1  NP_973834.1 
Orthologous [Ortholog page] LOC4329000 (osa)  LOC7478403 (ppo)  LOC11440035 (mtr)  LOC100306221 (gma)  LOC101265523 (sly)  LOC102660330 (gma)  LOC103836038 (bra)  LOC103872313 (bra)  LOC123093581 (tae)  LOC123098851 (tae)  LOC123105788 (tae)  LOC123171559 (tae)  LOC123443981 (hvu)  LOC123449788 (hvu) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1  (predict for NP_563966.1)
cyto 7,  chlo 1,  nucl 1  (predict for NP_973834.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563966.1)
other 8  (predict for NP_973834.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with CCMH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.5 MBD6 methyl-CPG-binding domain 6 [detail] 836057
5.3 SEN2 splicing endonuclease 2 [detail] 836145
5.0 MED32 mediator of RNA polymerase II transcription subunit-like protein [detail] 837720
Coexpressed
gene list		 [Coexpressed gene list for CCMH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262591_at
262591_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262591_at
262591_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262591_at
262591_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838089      
Refseq ID (protein) NP_563966.1 
NP_973834.1 


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