[←][→] ath   AT1G15390 Gene
functional annotation
Function   peptide deformylase 1A  
GO BP
GO:0043686 [list] [network] co-translational protein modification  (2 genes)  IDA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_563974.1 
BLAST NP_563974.1 
Orthologous [Ortholog page] PDF1A (sly)  LOC4324565 (osa)  LOC7478116 (ppo)  LOC11442038 (mtr)  LOC11442039 (mtr)  LOC25491322 (mtr)  LOC100258283 (vvi)  LOC100272955 (zma)  LOC100306710 (gma)  LOC100784292 (gma)  LOC103842904 (bra)  LOC103872331 (bra) 
Subcellular
localization
wolf
cyto 8,  mito 1,  pero 1,  E.R._vacu 1  (predict for NP_563974.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_563974.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PDF1A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT3G59980 Nucleic acid-binding, OB-fold-like protein [detail] 825168
8.1 EMB1241 Co-chaperone GrpE family protein [detail] 831638
7.6 AT3G08740 elongation factor P (EF-P) family protein [detail] 820021
6.8 NUDX27 nudix hydrolase homolog 27 [detail] 830522
5.9 AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 832022
5.8 AT5G67220 FMN-linked oxidoreductases superfamily protein [detail] 836857
Coexpressed
gene list		 [Coexpressed gene list for PDF1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262573_at
262573_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262573_at
262573_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262573_at
262573_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838109      
Refseq ID (protein) NP_563974.1 


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