[←][→] ath   At1g15390 Gene
functional annotation
Function   peptide deformylase 1A    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0043686 [list] [network] co-translational protein modification  (1 genes)  IDA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IDA  
KEGG
Protein NP_563974.1 
BLAST NP_563974.1 
Orthologous [Ortholog page] PDF1A (sly)  LOC4324565 (osa)  LOC7478116 (ppo)  LOC11442038 (mtr)  LOC11442039 (mtr)  LOC25491322 (mtr)  LOC100306710 (gma)  LOC100784292 (gma)  LOC103842904 (bra)  LOC103872331 (bra)  LOC123061301 (tae)  LOC123065402 (tae)  LOC123074495 (tae)  LOC123439893 (hvu) 
Subcellular
localization
wolf
cyto 8,  mito 1,  pero 1,  E.R._vacu 1  (predict for NP_563974.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_563974.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 8
ath01210 2-Oxocarboxylic acid metabolism 7
ath00290 Valine, leucine and isoleucine biosynthesis 5
ath00660 C5-Branched dibasic acid metabolism 3
ath00770 Pantothenate and CoA biosynthesis 2
Genes directly connected with PDF1A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 EMB1241 Co-chaperone GrpE family protein [detail] 831638
7.9 AT3G59980 Nucleic acid-binding, OB-fold-like protein [detail] 825168
7.9 AT1G14810 semialdehyde dehydrogenase family protein [detail] 838046
Coexpressed
gene list		 [Coexpressed gene list for PDF1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262573_at
262573_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262573_at
262573_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262573_at
262573_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838109      
Refseq ID (protein) NP_563974.1 


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