[←][→] ath   AT1G16190 Gene
functional annotation
Function   Rad23 UV excision repair protein family  
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO CC
GO:0000502 [list] [network] proteasome complex  (80 genes)  IBA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0070628 [list] [network] proteasome binding  (16 genes)  IBA IDA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (23 genes)  IBA IDA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IBA IDA  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001323115.1  NP_173070.1 
BLAST NP_001323115.1  NP_173070.1 
Orthologous [Ortholog page] RAD23B (ath)  LOC4328500 (osa)  LOC7462834 (ppo)  LOC7476798 (ppo)  LOC25488002 (mtr)  LOC100267246 (vvi)  LOC100282427 (zma)  LOC100778187 (gma)  LOC100804038 (gma)  LOC100819019 (gma)  LOC101251966 (sly)  LOC103830472 (bra)  LOC103842858 (bra)  LOC103872412 (bra) 
Subcellular
localization
wolf
nucl 5,  nucl_plas 4,  plas 2,  cyto 1,  mito 1,  pero 1,  cyto_E.R. 1  (predict for NP_001323115.1)
chlo 5,  nucl_plas 1,  nucl 1,  plas 1,  cyto 1,  extr 1,  pero 1,  golg 1,  cyto_pero 1  (predict for NP_173070.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001323115.1)
other 9  (predict for NP_173070.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with RAD23A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT3G49720 transmembrane protein [detail] 824134
5.4 emb2444 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 816366
5.4 AT3G27325 hydrolases, acting on ester bond [detail] 822352
Coexpressed
gene list		 [Coexpressed gene list for RAD23A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262708_at
262708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262708_at
262708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262708_at
262708_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838188      
Refseq ID (protein) NP_001323115.1 
NP_173070.1 


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