[←][→] ath   AT1G16720 Gene
functional annotation
Function   high chlorophyll fluorescence phenotype 173  
GO BP
GO:0010207 [list] [network] photosystem II assembly  (25 genes)  IMP  
GO:0006413 [list] [network] translational initiation  (95 genes)  IMP  
GO CC
GO:0009523 [list] [network] photosystem II  (52 genes)  IEA  
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IEA  
GO:0042651 [list] [network] thylakoid membrane  (391 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001323375.1  NP_001323376.1  NP_173116.1 
BLAST NP_001323375.1  NP_001323376.1  NP_173116.1 
Orthologous [Ortholog page] LOC4328240 (osa)  LOC4341998 (osa)  LOC11428397 (mtr)  LOC100256501 (vvi)  LOC100501691 (zma)  LOC100779812 (gma)  LOC100811347 (gma)  LOC101263137 (sly)  LOC103872461 (bra) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001323375.1)
chlo 9,  chlo_mito 5  (predict for NP_001323376.1)
chlo 9,  chlo_mito 5  (predict for NP_173116.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001323375.1)
chlo 7  (predict for NP_001323376.1)
chlo 7  (predict for NP_173116.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
Genes directly connected with HCF173 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.4 FTSH1 FTSH protease 1 [detail] 841447
9.6 HCF244 NAD(P)-binding Rossmann-fold superfamily protein [detail] 829678
9.0 VAR1 FtsH extracellular protease family [detail] 834232
7.2 GLDP2 glycine decarboxylase P-protein 2 [detail] 817149
6.7 OHP2 one-helix protein 2 [detail] 840297
Coexpressed
gene list		 [Coexpressed gene list for HCF173]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255764_at
255764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255764_at
255764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255764_at
255764_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838243      
Refseq ID (protein) NP_001323375.1 
NP_001323376.1 
NP_173116.1 


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