[←][→] ath   At1g16720 Gene
functional annotation
Function   high chlorophyll fluorescence phenotype 173    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006413 [list] [network] translational initiation  (19 genes)  IMP  
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  IMP  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (118 genes)  IDA  
GO:0042651 [list] [network] thylakoid membrane  (350 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001323375.1  NP_001323376.1  NP_173116.1 
BLAST NP_001323375.1  NP_001323376.1  NP_173116.1 
Orthologous [Ortholog page] LOC4328240 (osa)  LOC4341998 (osa)  LOC7497749 (ppo)  LOC11428397 (mtr)  LOC18104727 (ppo)  LOC100779812 (gma)  LOC100811347 (gma)  LOC101263137 (sly)  LOC103872461 (bra)  LOC123148589 (tae)  LOC123156704 (tae)  LOC123166969 (tae)  LOC123412252 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001323375.1)
chlo 9,  chlo_mito 5  (predict for NP_001323376.1)
chlo 9,  chlo_mito 5  (predict for NP_173116.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001323375.1)
chlo 7  (predict for NP_001323376.1)
chlo 7  (predict for NP_173116.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HCF173 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.4 FTSH1 FTSH protease 1 [detail] 841447
10.2 AT5G35970 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 833589
9.8 HCF244 NAD(P)-binding Rossmann-fold superfamily protein [detail] 829678
9.0 OHP2 one-helix protein 2 [detail] 840297
7.3 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 841720
Coexpressed
gene list		 [Coexpressed gene list for HCF173]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255764_at
255764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255764_at
255764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255764_at
255764_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838243      
Refseq ID (protein) NP_001323375.1 
NP_001323376.1 
NP_173116.1 


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