[←][→] ath   AT1G17680 Gene
functional annotation
Function   tetratricopeptide repeat (TPR)-containing protein  
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (17 genes)  IBA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (6 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001004 [list] [network] RNA polymerase III transcription regulator recruiting activity  (3 genes)  IEA  
GO:0000995 [list] [network] RNA polymerase III general transcription initiation factor activity  (6 genes)  IBA  
KEGG
Protein NP_001322831.1  NP_173210.3  NP_850945.1 
BLAST NP_001322831.1  NP_173210.3  NP_850945.1 
Orthologous [Ortholog page] LOC4350254 (osa)  LOC11420262 (mtr)  LOC11444918 (mtr)  LOC100257006 (vvi)  LOC100804533 (gma)  LOC100813793 (gma)  LOC101258763 (sly)  LOC103652996 (zma)  LOC103872551 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001322831.1)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_173210.3)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_850945.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001322831.1)
other 9  (predict for NP_173210.3)
other 9  (predict for NP_850945.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04136 Autophagy - other 2
Genes directly connected with AT1G17680 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 VPS15 protein kinase family protein / WD-40 repeat family protein [detail] 829059
7.2 SUA suppressor of abi3-5 [detail] 824590
7.0 TOP1ALPHA DNA topoisomerase I alpha [detail] 835623
6.5 AT3G17740 hypothetical protein [detail] 821042
5.3 RAD4 DNA repair protein Rad4 family [detail] 831525
5.3 RL2 Root hair defective 3 GTP-binding protein (RHD3) [detail] 834552
Coexpressed
gene list		 [Coexpressed gene list for AT1G17680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259397_at
259397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259397_at
259397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259397_at
259397_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838344      
Refseq ID (protein) NP_001322831.1 
NP_173210.3 
NP_850945.1 


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