[←][→] ath   At1g17680 Gene
functional annotation
Function   tetratricopeptide repeat (TPR)-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001322831.1  NP_173210.3  NP_850945.1 
BLAST NP_001322831.1  NP_173210.3  NP_850945.1 
Orthologous [Ortholog page] LOC4350254 (osa)  LOC11420262 (mtr)  LOC11444918 (mtr)  LOC100804533 (gma)  LOC100813793 (gma)  LOC101258763 (sly)  LOC103872551 (bra)  LOC123104989 (tae)  LOC123113279 (tae)  LOC123122792 (tae)  LOC123452182 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001322831.1)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_173210.3)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_850945.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001322831.1)
other 9  (predict for NP_173210.3)
other 9  (predict for NP_850945.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G17680 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 AT3G17740 uncharacterized protein [detail] 821042
7.8 VPS15 protein kinase family protein / WD-40 repeat family protein [detail] 829059
7.3 HUB2 histone mono-ubiquitination 2 [detail] 841968
5.7 RL2 Root hair defective 3 GTP-binding protein (RHD3) [detail] 834552
Coexpressed
gene list		 [Coexpressed gene list for AT1G17680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259397_at
259397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259397_at
259397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259397_at
259397_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838344      
Refseq ID (protein) NP_001322831.1 
NP_173210.3 
NP_850945.1 


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