[←][→] ath   At1g17760 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042868 [list] [network] antisense RNA metabolic process  (2 genes)  IMP  
GO:0031123 [list] [network] RNA 3'-end processing  (26 genes)  IMP  
GO:0016441 [list] [network] post-transcriptional gene silencing  (105 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0031047 [list] [network] RNA-mediated gene silencing  (176 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_173218.2 
BLAST NP_173218.2 
Orthologous [Ortholog page] LOC4352587 (osa)  LOC7465490 (ppo)  LOC11408840 (mtr)  LOC100799377 (gma)  LOC101249869 (sly)  LOC103835942 (bra)  LOC123060144 (tae)  LOC123068618 (tae)  LOC123077153 (tae)  LOC123442691 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_173218.2)
Subcellular
localization
TargetP
other 7  (predict for NP_173218.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
Genes directly connected with CSTF77 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 AT3G57570 ARM repeat superfamily protein [detail] 824924
5.8 PRP39 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839314
5.6 AT3G46920 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [detail] 823845
Coexpressed
gene list		 [Coexpressed gene list for CSTF77]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259401_at
259401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259401_at
259401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259401_at
259401_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838354      
Refseq ID (protein) NP_173218.2 


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