[←][→] ath   AT1G18540 Gene
functional annotation
Function   Ribosomal protein L6 family protein  
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (33 genes)  IBA  
GO:0002181 [list] [network] cytoplasmic translation  (53 genes)  IBA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (136 genes)  IBA IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_173289.1 
BLAST NP_173289.1 
Orthologous [Ortholog page] AT1G74050 (ath)  AT1G74060 (ath)  LOC4329831 (osa)  LOC4336140 (osa)  LOC7454890 (ppo)  LOC11418706 (mtr)  LOC11423674 (mtr)  LOC11432177 (mtr)  LOC11445274 (mtr)  LOC100191612 (zma)  LOC100252724 (vvi)  LOC100257150 (vvi)  LOC100499766 (gma)  LOC100500022 (gma)  LOC100784101 (gma)  LOC100785356 (gma)  LOC100809343 (gma)  LOC100811720 (gma)  LOC101250600 (sly)  LOC101252946 (sly)  LOC101262004 (sly)  LOC103627361 (zma)  LOC103653691 (zma)  LOC103831880 (bra)  LOC103835901 (bra)  LOC103842696 (bra)  LOC103852878 (bra)  LOC103872617 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_173289.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for NP_173289.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with AT1G18540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.2 AT3G04840 Ribosomal protein S3Ae [detail] 819644
14.7 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 819374
14.1 AT2G01250 Ribosomal protein L30/L7 family protein [detail] 814652
10.4 BTF3 basic transcription factor 3 [detail] 838367
Coexpressed
gene list		 [Coexpressed gene list for AT1G18540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255776_at
255776_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255776_at
255776_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255776_at
255776_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838435      
Refseq ID (protein) NP_173289.1 


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