[←][→] ath   At1g19150 Gene
functional annotation
Function   PSI type II chlorophyll a/b-binding protein (Lhca2*1)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (10 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_173349.1 
BLAST NP_173349.1 
Orthologous [Ortholog page] LOC4347166 (osa)  LOC11440680 (mtr)  LOC18100311 (ppo)  LOC100800374 (gma)  LOC100812066 (gma)  LOC101252151 (sly)  LOC103835863 (bra)  LOC123103760 (tae)  LOC123111982 (tae)  LOC123121545 (tae)  LOC123397504 (hvu) 
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  vacu 1  (predict for NP_173349.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_173349.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
Genes directly connected with Lhca6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.7 NdhN oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor [detail] 835938
10.4 PnsL1 PsbP-like protein 2 [detail] 818532
10.4 PnsL2 PsbQ-like 2 [detail] 837974
10.2 PnsB3 NDH-dependent cyclic electron flow 1 [detail] 820871
9.5 NdhM subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex [detail] 3770591
7.6 AT3G19480 D-3-phosphoglycerate dehydrogenase [detail] 821482
7.1 AT3G50685 anti-muellerian hormone type-2 receptor [detail] 824232
7.1 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 843747
6.5 AT1G50732 uncharacterized protein [detail] 10723115
Coexpressed
gene list		 [Coexpressed gene list for Lhca6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256015_at
256015_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256015_at
256015_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256015_at
256015_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838498      
Refseq ID (protein) NP_173349.1 


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