[←][→] ath   At1g19330 Gene
functional annotation
Function   histone deacetylase complex subunit    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042752 [list] [network] regulation of circadian rhythm  (61 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001077561.1  NP_001185033.1  NP_564079.1 
BLAST NP_001077561.1  NP_001185033.1  NP_564079.1 
Orthologous [Ortholog page] AT1G75060 (ath)  LOC4331195 (osa)  LOC4335053 (osa)  LOC4348437 (osa)  LOC7472754 (ppo)  LOC7483776 (ppo)  LOC18097043 (ppo)  LOC18105004 (ppo)  LOC25482104 (mtr)  LOC25490176 (mtr)  LOC100784573 (gma)  LOC100787225 (gma)  LOC100806535 (gma)  LOC100809195 (gma)  LOC101249354 (sly)  LOC101252312 (sly)  LOC103831967 (bra)  LOC103835849 (bra)  LOC103842651 (bra)  LOC103852930 (bra)  LOC103872729 (bra)  LOC108868776 (bra)  LOC123043015 (tae)  LOC123050918 (tae)  LOC123186877 (tae)  LOC123431443 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001077561.1)
nucl 5,  cyto 4,  chlo 1,  extr 1  (predict for NP_001185033.1)
nucl 5,  cyto 4,  chlo 1,  extr 1  (predict for NP_564079.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001077561.1)
other 6  (predict for NP_001185033.1)
other 6  (predict for NP_564079.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G19330 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 AT1G19340 Methyltransferase MT-A70 family protein [detail] 838516
4.8 HVA22A HVA22 homologue A [detail] 843793
4.3 OZF2 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 829040
Coexpressed
gene list		 [Coexpressed gene list for AT1G19330]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260673_at
260673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260673_at
260673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260673_at
260673_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838515      
Refseq ID (protein) NP_001077561.1 
NP_001185033.1 
NP_564079.1 


The preparation time of this page was 0.1 [sec].