[←][→] ath   At1g19520 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000741 [list] [network] karyogamy  (32 genes)  IMP  
GO:0010197 [list] [network] polar nucleus fusion  (32 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_001185038.1  NP_564088.2 
BLAST NP_001185038.1  NP_564088.2 
Orthologous [Ortholog page] LOC4329957 (osa)  LOC7477616 (ppo)  LOC25482154 (mtr)  LOC100794017 (gma)  LOC100801933 (gma)  LOC101261041 (sly)  LOC103872756 (bra)  LOC123127680 (tae)  LOC123137445 (tae)  LOC123144792 (tae)  LOC123401353 (hvu) 
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3  (predict for NP_001185038.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for NP_564088.2)
Subcellular
localization
TargetP
mito 5,  chlo 5  (predict for NP_001185038.1)
mito 5,  chlo 5  (predict for NP_564088.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
Genes directly connected with NFD5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 AT2G37230 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 818300
8.6 AT3G02760 Class II aaRS and biotin synthetases superfamily protein [detail] 820930
8.3 AT1G55890 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 842039
7.9 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic [detail] 832718
6.8 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein [detail] 831455
Coexpressed
gene list		 [Coexpressed gene list for NFD5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260670_at
260670_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260670_at
260670_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260670_at
260670_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838538      
Refseq ID (protein) NP_001185038.1 
NP_564088.2 


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