[][] ath   AT1G19520 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein
GO BP
GO:0000741 [list] [network] karyogamy  (31 genes)  IMP  
GO:0010197 [list] [network] polar nucleus fusion  (31 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_001185038.1  NP_564088.2 
BLAST NP_001185038.1  NP_564088.2 
Orthologous [Ortholog page] LOC4329957 (osa)LOC25482154 (mtr)LOC100191497 (zma)LOC100267767 (vvi)LOC100794017 (gma)LOC100801933 (gma)LOC101261041 (sly)LOC103872756 (bra)
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3  (predict for NP_001185038.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for NP_564088.2)
Subcellular
localization
TargetP
mito 5,  chlo 5  (predict for NP_001185038.1)
mito 5,  chlo 5  (predict for NP_564088.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with NFD5 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.8 AT3G02760 Class II aaRS and biotin synthetases superfamily protein [detail] 820930
7.7 AT2G37230 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 818300
7.1 PNM1 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836217
5.9 AT3G48187 Serine/Threonine-kinase ATM [detail] 28719387
Coexpressed
gene list
[Coexpressed gene list for NFD5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260670_at
260670_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260670_at
260670_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260670_at
260670_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 838538    
Refseq ID (protein) NP_001185038.1 
NP_564088.2 


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