[←][→] ath   AT1G20370 Gene
functional annotation
Function   Pseudouridine synthase family protein  
GO BP
GO:0031119 [list] [network] tRNA pseudouridine synthesis  (5 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (20 genes)  TAS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_564112.1 
BLAST NP_564112.1 
Orthologous [Ortholog page] AT1G76120 (ath)  LOC4330262 (osa)  LOC11440088 (mtr)  LOC11442694 (mtr)  LOC100267766 (vvi)  LOC100283773 (zma)  LOC100778978 (gma)  LOC101250299 (sly)  LOC103832059 (bra)  LOC103872832 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_564112.1)
Subcellular
localization
TargetP
other 9  (predict for NP_564112.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03013 RNA transport 2
Genes directly connected with AT1G20370 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 AT5G39900 Small GTP-binding protein [detail] 833987
8.0 AT4G28200 U3 small nucleolar RNA-associated-like protein [detail] 828935
8.0 RH36 RNA helicase 36 [detail] 838197
7.4 AT2G34970 Trimeric LpxA-like enzyme [detail] 818061
7.2 AT3G26850 histone-lysine N-methyltransferase [detail] 822300
Coexpressed
gene list		 [Coexpressed gene list for AT1G20370]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255887_at
255887_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255887_at
255887_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255887_at
255887_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838625      
Refseq ID (protein) NP_564112.1 


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