[←][→] ath   AT1G20440 Gene
functional annotation
Function   cold-regulated 47  
GO BP
GO:0010286 [list] [network] heat acclimation  (53 genes)  IEP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IBA IGI ISS  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IBA IMP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IGI  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IBA IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0016020 [list] [network] membrane  (7839 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA ISM  
GO MF
KEGG
Protein NP_173468.1 
BLAST NP_173468.1 
Orthologous [Ortholog page] ERD10 (ath)  ERD14 (ath)  LOC11420442 (mtr)  LOC100816984 (gma)  dhn (sly)  LOC103829428 (bra)  LOC103830625 (bra)  LOC103832067 (bra)  LOC103853006 (bra)  LOC103872837 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  extr 1,  chlo 1,  cysk 1  (predict for NP_173468.1)
Subcellular
localization
TargetP
other 8  (predict for NP_173468.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with COR47 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.4 ERD10 Dehydrin family protein [detail] 838633
11.6 ERD14 Dehydrin family protein [detail] 843950
10.5 LTI78 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) [detail] 835307
8.1 COR413-PM1 cold regulated 413 plasma membrane 1 [detail] 816092
4.8 CIPK25 CBL-interacting protein kinase 25 [detail] 832582
4.6 AT3G55940 Phosphoinositide-specific phospholipase C family protein [detail] 824760
4.1 AT3G04010 O-Glycosyl hydrolases family 17 protein [detail] 819556
Coexpressed
gene list		 [Coexpressed gene list for COR47]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259570_at
259570_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259570_at
259570_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259570_at
259570_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838632      
Refseq ID (protein) NP_173468.1 


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