[←][→] ath   At1g20510 Gene
functional annotation
Function   OPC-8:0 CoA ligase1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009695 [list] [network] jasmonic acid biosynthetic process  (26 genes)  IDA IMP  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IDA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEP  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IDA  
GO CC
GO:0005777 [list] [network] peroxisome  (311 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  ISS  
GO:0016405 [list] [network] CoA-ligase activity  (32 genes)  IDA  
KEGG ath00592 [list] [network] alpha-Linolenic acid metabolism (43 genes)
Protein NP_001322647.1  NP_564115.1  NP_973872.1 
BLAST NP_001322647.1  NP_564115.1  NP_973872.1 
Orthologous [Ortholog page] 4CL8 (ath)  AT1G20490 (ath)  AT1G20500 (ath)  LOC4331515 (osa)  LOC7494676 (ppo)  LOC11445262 (mtr)  LOC25482216 (mtr)  LOC100811344 (gma)  LOC101251665 (sly)  LOC103829425 (bra)  LOC103829426 (bra)  LOC103835791 (bra)  LOC103835794 (bra)  LOC103872841 (bra)  LOC123093611 (tae)  LOC123098882 (tae)  LOC123105815 (tae)  LOC123449771 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  vacu 1  (predict for NP_001322647.1)
chlo 9  (predict for NP_564115.1)
chlo 7,  mito 1,  nucl 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_973872.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001322647.1)
chlo 7  (predict for NP_564115.1)
chlo 7  (predict for NP_973872.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 6
ath04075 Plant hormone signal transduction 5
ath00591 Linoleic acid metabolism 2
Genes directly connected with OPCL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.3 OPR3 oxophytodienoate-reductase 3 [detail] 815160
10.6 LOX4 PLAT/LH2 domain-containing lipoxygenase family protein [detail] 843584
9.6 JAZ5 jasmonate-zim-domain protein 5 [detail] 838310
8.6 AT3G51450 Calcium-dependent phosphotriesterase superfamily protein [detail] 824308
8.2 JAZ1 jasmonate-zim-domain protein 1 [detail] 838501
6.1 RBOHD respiratory burst oxidase homologue D [detail] 834842
Coexpressed
gene list		 [Coexpressed gene list for OPCL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259518_at
259518_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259518_at
259518_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259518_at
259518_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838639      
Refseq ID (protein) NP_001322647.1 
NP_564115.1 
NP_973872.1 


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