[←][→] ath   AT1G20693 Gene
functional annotation
Function   high mobility group B2  
GO BP
GO:0006333 [list] [network] chromatin assembly or disassembly  (52 genes)  TAS  
GO CC
GO:0000785 [list] [network] chromatin  (160 genes)  TAS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IDA ISM  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (5 genes)  TAS  
GO:0003682 [list] [network] chromatin binding  (126 genes)  TAS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA ISS  
KEGG
Protein NP_001031074.1  NP_001077569.1  NP_564123.1 
BLAST NP_001031074.1  NP_001077569.1  NP_564123.1 
Orthologous [Ortholog page] LOC542658 (zma)  LOC547975 (gma)  HMGB3 (ath)  LOC4347789 (osa)  LOC7480462 (ppo)  LOC11407325 (mtr)  LOC25490320 (mtr)  LOC25501590 (mtr)  LOC100246082 (vvi)  LOC100257544 (vvi)  LOC100284781 (zma)  LOC100305957 (gma)  LOC100499992 (gma)  LOC100500173 (gma)  LOC101257131 (sly)  LOC101264099 (sly)  LOC103829416 (bra)  LOC103835781 (bra)  LOC103872857 (bra)  LOC109944069 (zma) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001031074.1)
nucl 9  (predict for NP_001077569.1)
nucl 9  (predict for NP_564123.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for NP_001031074.1)
chlo 6,  other 3  (predict for NP_001077569.1)
chlo 6,  other 3  (predict for NP_564123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HMGB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.4 HMGB3 high mobility group B3 [detail] 838659
8.1 AT2G28720 Histone superfamily protein [detail] 817421
6.4 AT5G49015 Expressed protein [detail] 2746203
Coexpressed
gene list		 [Coexpressed gene list for HMGB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256091_at
256091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256091_at
256091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256091_at
256091_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838658      
Refseq ID (protein) NP_001031074.1 
NP_001077569.1 
NP_564123.1 


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