[][] ath   At1g20880 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001185049.1  NP_001322434.1  NP_564127.1 
BLAST NP_001185049.1  NP_001322434.1  NP_564127.1 
Orthologous [Ortholog page] AT1G76460 (ath)LOC4330510 (osa)LOC4341556 (osa)LOC7471743 (ppo)LOC7485663 (ppo)LOC11412629 (mtr)LOC100779244 (gma)LOC100782606 (gma)LOC101267474 (sly)LOC101268392 (sly)LOC103829408 (bra)LOC103832109 (bra)LOC103835770 (bra)LOC103872876 (bra)LOC123128176 (tae)LOC123137987 (tae)LOC123145274 (tae)LOC123148422 (tae)LOC123160200 (tae)LOC123164723 (tae)LOC123401010 (hvu)LOC123402007 (hvu)LOC123410805 (hvu)
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_001185049.1)
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_001322434.1)
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_564127.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001185049.1)
other 6  (predict for NP_001322434.1)
other 6  (predict for NP_564127.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G20880 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843979
7.5 AtATG18a Transducin/WD40 repeat-like superfamily protein [detail] 825452
6.9 AT3G24740 cellulose synthase, putative (DUF1644) [detail] 822072
Coexpressed
gene list
[Coexpressed gene list for AT1G20880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262804_at
262804_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262804_at
262804_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262804_at
262804_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 838681    
Refseq ID (protein) NP_001185049.1 
NP_001322434.1 
NP_564127.1 


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