[←][→] ath   AT1G20880 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_001185049.1  NP_001322434.1  NP_564127.1 
BLAST NP_001185049.1  NP_001322434.1  NP_564127.1 
Orthologous [Ortholog page] AT1G76460 (ath)  LOC4330510 (osa)  LOC4341556 (osa)  LOC7471743 (ppo)  LOC7485663 (ppo)  LOC11412629 (mtr)  LOC100258188 (vvi)  LOC100279322 (zma)  LOC100284337 (zma)  LOC100501435 (zma)  LOC100779244 (gma)  LOC100782606 (gma)  LOC101268392 (sly)  LOC103638790 (zma)  LOC103829408 (bra)  LOC103832109 (bra)  LOC103835770 (bra)  LOC103872876 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_001185049.1)
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_001322434.1)
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_564127.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001185049.1)
other 6  (predict for NP_001322434.1)
other 6  (predict for NP_564127.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT1G20880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843979
6.4 AT3G24740 cellulose synthase, putative (DUF1644) [detail] 822072
6.2 AtATG18a Transducin/WD40 repeat-like superfamily protein [detail] 825452
4.8 AT4G39140 RING/U-box superfamily protein [detail] 830069
Coexpressed
gene list		 [Coexpressed gene list for AT1G20880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262804_at
262804_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262804_at
262804_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262804_at
262804_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838681      
Refseq ID (protein) NP_001185049.1 
NP_001322434.1 
NP_564127.1 


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