| functional annotation |
| Function |
thiamine diphosphate-binding fold (THDP-binding) superfamily protein |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0043617 [list] [network] cellular response to sucrose starvation
|
(4 genes)
|
IEP
|
 |
|
GO:0009083 [list] [network] branched-chain amino acid catabolic process
|
(19 genes)
|
IGI
|
|
|
GO:0009646 [list] [network] response to absence of light
|
(50 genes)
|
IEP
|
|
|
GO:0009744 [list] [network] response to sucrose
|
(74 genes)
|
IEP
|
|
|
| GO CC |
|
GO:0005739 [list] [network] mitochondrion
|
(4228 genes)
|
ISM
|
|
|
GO:0009507 [list] [network] chloroplast
|
(5004 genes)
|
ISM
|
|
|
| GO MF |
|
GO:0003863 [list] [network] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
|
(4 genes)
|
IEA
|
|
|
GO:0016624 [list] [network] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
|
(8 genes)
|
IEA
|
|
|
| KEGG |
ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes) |
 |
| ath00640 [list] [network] Propanoate metabolism (41 genes) |
|
| Protein |
NP_001320427.1
NP_001320428.1
NP_001320429.1
NP_001320430.1
NP_001320431.1
NP_173562.1
|
| BLAST |
NP_001320427.1
NP_001320428.1
NP_001320429.1
NP_001320430.1
NP_001320431.1
NP_173562.1
|
| Orthologous |
[Ortholog page]
AT5G09300 (ath)
LOC4351684 (osa)
LOC7466848 (ppo)
LOC7467843 (ppo)
LOC7469191 (ppo)
LOC11424992 (mtr)
LOC25489740 (mtr)
LOC100682406 (tae)
LOC100779198 (gma)
LOC100789693 (gma)
LOC100796766 (gma)
LOC101244007 (sly)
LOC101254378 (sly)
LOC101267118 (sly)
LOC103835749 (bra)
LOC103855815 (bra)
LOC103872977 (bra)
LOC123091068 (tae)
LOC123102909 (tae)
LOC123111084 (tae)
LOC123395411 (hvu)
|
Subcellular
localization
wolf |
|
cyto 5,
chlo 3,
cyto_nucl 3
|
(predict for NP_001320427.1)
|
|
chlo 9,
mito 1
|
(predict for NP_001320428.1)
|
|
cyto 5,
chlo 3,
cyto_nucl 3
|
(predict for NP_001320429.1)
|
|
chlo 8,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_001320430.1)
|
|
cyto 5,
nucl 3,
cysk 2
|
(predict for NP_001320431.1)
|
|
mito 4,
chlo 4,
cyto 1
|
(predict for NP_173562.1)
|
|
Subcellular
localization
TargetP |
|
other 7
|
(predict for NP_001320427.1)
|
|
other 7
|
(predict for NP_001320428.1)
|
|
other 7
|
(predict for NP_001320429.1)
|
|
other 7
|
(predict for NP_001320430.1)
|
|
other 8
|
(predict for NP_001320431.1)
|
|
mito 8
|
(predict for NP_173562.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00280 |
Valine, leucine and isoleucine degradation |
5 |
 |
| ath01230 |
Biosynthesis of amino acids |
3 |
 |
| ath00260 |
Glycine, serine and threonine metabolism |
2 |
 |
| ath00270 |
Cysteine and methionine metabolism |
2 |
 |
| ath00350 |
Tyrosine metabolism |
2 |
 |
Genes directly connected with AT1G21400 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 9.7 |
THA1 |
threonine aldolase 1 |
[detail] |
837385 |
| 9.0 |
BCAT-2 |
branched-chain amino acid transaminase 2 |
[detail] |
837543 |
| 8.3 |
IVD |
isovaleryl-CoA-dehydrogenase |
[detail] |
823668 |
| 6.6 |
PPDK |
pyruvate orthophosphate dikinase |
[detail] |
827226 |
| 5.9 |
MGL |
methionine gamma-lyase |
[detail] |
842774 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G21400]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
At1g21400 Gene
