ATTED-II : GeneID search result

[←][→] ath At1g21550 Gene

functional annotation

Function

Calcium-binding EF-hand family protein

GO BP

GO:0071456 [list] [network] cellular response to hypoxia	(241 genes)	HEP
GO:0009753 [list] [network] response to jasmonic acid	(611 genes)	IEA
GO:0009056 [list] [network] catabolic process	(1436 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

KEGG

ath04626 [list] [network] Plant-pathogen interaction (204 genes)

Protein

NP_564143.1

BLAST

NP_564143.1

Orthologous

[Ortholog page] LOC7467855 (ppo) LOC7469180 (ppo) LOC11418206 (mtr) LOC25489713 (mtr) LOC100500561 (gma) LOC100527117 (gma) LOC100779760 (gma) LOC101245247 (sly) LOC101245539 (sly) LOC103872996 (bra)

Subcellular
localization
wolf

cyto 7, nucl 1, mito 1, E.R. 1, cysk_nucl 1, nucl_plas 1

(predict for NP_564143.1)

Subcellular
localization
TargetP

other 8

(predict for NP_564143.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	7

Genes directly connected with AT1G21550 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.3	AT2G46600	Calcium-binding EF-hand family protein	[detail]	819272
5.1	AT2G32140	transmembrane receptor	[detail]	817773
5.1	AT1G66090	Disease resistance protein (TIR-NBS class)	[detail]	842923

Coexpressed
gene list

[Coexpressed gene list for AT1G21550]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260881_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260881_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260881_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838756
Refseq ID (protein)	NP_564143.1

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