[←][→] ath   At1g21580 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein      
GO BP
GO:0060149 [list] [network] negative regulation of post-transcriptional gene silencing  (8 genes)  IMP  
GO:0043484 [list] [network] regulation of RNA splicing  (21 genes)  IMP  
GO CC
GO:0016607 [list] [network] nuclear speck  (50 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001322596.1  NP_001322597.1  NP_001322598.1  NP_001322599.1  NP_001322600.1  NP_001322601.1  NP_001322602.1  NP_001322603.1  NP_173577.2 
BLAST NP_001322596.1  NP_001322597.1  NP_001322598.1  NP_001322599.1  NP_001322600.1  NP_001322601.1  NP_001322602.1  NP_001322603.1  NP_173577.2 
Orthologous [Ortholog page] LOC4341610 (osa)  LOC7467858 (ppo)  LOC18099604 (ppo)  LOC25482449 (mtr)  LOC100788859 (gma)  LOC100802468 (gma)  LOC101244480 (sly)  LOC103835742 (bra)  LOC103872998 (bra)  LOC123149601 (tae)  LOC123162769 (tae)  LOC123168683 (tae)  LOC123409548 (hvu) 
Subcellular
localization
wolf
nucl 9,  vacu 1  (predict for NP_001322596.1)
nucl 9  (predict for NP_001322597.1)
nucl 9  (predict for NP_001322598.1)
nucl 9,  vacu 1  (predict for NP_001322599.1)
nucl 9  (predict for NP_001322600.1)
nucl 9  (predict for NP_001322601.1)
nucl 9  (predict for NP_001322602.1)
nucl 9  (predict for NP_001322603.1)
nucl 9  (predict for NP_173577.2)
Subcellular
localization
TargetP
other 7,  chlo 7  (predict for NP_001322596.1)
other 7,  chlo 7  (predict for NP_001322597.1)
other 7,  chlo 7  (predict for NP_001322598.1)
other 7,  chlo 7  (predict for NP_001322599.1)
other 7,  chlo 7  (predict for NP_001322600.1)
other 7,  chlo 7  (predict for NP_001322601.1)
other 7,  chlo 7  (predict for NP_001322602.1)
other 7,  chlo 7  (predict for NP_001322603.1)
other 7,  chlo 7  (predict for NP_173577.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G21580 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 AT4G01290 chorismate synthase [detail] 828103
9.5 SETH5 transducin family protein / WD-40 repeat family protein [detail] 828005
8.9 AT5G13590 uncharacterized protein [detail] 831203
8.4 HEN4 RNA-binding KH domain-containing protein [detail] 836560
7.9 AT2G42270 U5 small nuclear ribonucleoprotein helicase [detail] 818828
7.3 CPL3 C-terminal domain phosphatase-like 3 [detail] 817919
4.8 AT4G19090 transmembrane protein, putative (DUF594) [detail] 827647
Coexpressed
gene list		 [Coexpressed gene list for AT1G21580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260873_at
260873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260873_at
260873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260873_at
260873_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838759      
Refseq ID (protein) NP_001322596.1 
NP_001322597.1 
NP_001322598.1 
NP_001322599.1 
NP_001322600.1 
NP_001322601.1 
NP_001322602.1 
NP_001322603.1 
NP_173577.2 


The preparation time of this page was 0.1 [sec].