[←][→] ath   AT1G21580 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein  
GO BP
GO:0060149 [list] [network] negative regulation of posttranscriptional gene silencing  (8 genes)  IMP  
GO:0043484 [list] [network] regulation of RNA splicing  (40 genes)  IMP  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001322596.1  NP_001322597.1  NP_001322598.1  NP_001322599.1  NP_001322600.1  NP_001322601.1  NP_001322602.1  NP_001322603.1  NP_173577.2 
BLAST NP_001322596.1  NP_001322597.1  NP_001322598.1  NP_001322599.1  NP_001322600.1  NP_001322601.1  NP_001322602.1  NP_001322603.1  NP_173577.2 
Orthologous [Ortholog page] LOC4341610 (osa)  LOC7467858 (ppo)  LOC25482449 (mtr)  LOC100262507 (vvi)  LOC100788859 (gma)  LOC100802468 (gma)  LOC101244480 (sly)  LOC103638749 (zma)  LOC103835742 (bra)  LOC103872998 (bra)  LOC106797167 (gma) 
Subcellular
localization
wolf
nucl 9,  vacu 1  (predict for NP_001322596.1)
nucl 9  (predict for NP_001322597.1)
nucl 9  (predict for NP_001322598.1)
nucl 9,  vacu 1  (predict for NP_001322599.1)
nucl 9  (predict for NP_001322600.1)
nucl 9  (predict for NP_001322601.1)
nucl 9  (predict for NP_001322602.1)
nucl 9  (predict for NP_001322603.1)
nucl 9  (predict for NP_173577.2)
Subcellular
localization
TargetP
other 7,  chlo 7  (predict for NP_001322596.1)
other 7,  chlo 7  (predict for NP_001322597.1)
other 7,  chlo 7  (predict for NP_001322598.1)
other 7,  chlo 7  (predict for NP_001322599.1)
other 7,  chlo 7  (predict for NP_001322600.1)
other 7,  chlo 7  (predict for NP_001322601.1)
other 7,  chlo 7  (predict for NP_001322602.1)
other 7,  chlo 7  (predict for NP_001322603.1)
other 7,  chlo 7  (predict for NP_173577.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G21580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.4 MEE44 Nucleotidyltransferase family protein [detail] 828214
13.6 AT3G62900 CW-type Zinc Finger [detail] 825465
12.1 PI-4KBETA1 phosphatidylinositol 4-OH kinase beta1 [detail] 836528
10.5 SETH5 transducin family protein / WD-40 repeat family protein [detail] 828005
8.8 HEN4 RNA-binding KH domain-containing protein [detail] 836560
8.6 AT1G19720 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 838561
8.4 AT5G13590 hypothetical protein [detail] 831203
7.2 CPK23 calcium-dependent protein kinase 23 [detail] 825809
5.0 AT1G74350 Intron maturase, type II family protein [detail] 843776
Coexpressed
gene list		 [Coexpressed gene list for AT1G21580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260873_at
260873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260873_at
260873_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260873_at
260873_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838759      
Refseq ID (protein) NP_001322596.1 
NP_001322597.1 
NP_001322598.1 
NP_001322599.1 
NP_001322600.1 
NP_001322601.1 
NP_001322602.1 
NP_001322603.1 
NP_173577.2 


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