ATTED-II : GeneID search result

[←][→] ath At1g21780 Gene

functional annotation

Function

BTB/POZ domain-containing protein

GO BP

GO:0016567 [list] [network] protein ubiquitination

(434 genes)

IEA

GO CC

GO:0031463 [list] [network] Cul3-RING ubiquitin ligase complex	(3 genes)	IPI
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5066 genes)

IPI

KEGG

Protein

NP_001077574.1 NP_173597.1

BLAST

NP_001077574.1 NP_173597.1

Orthologous

[Ortholog page] LOC4344432 (osa) LOC7463153 (ppo) LOC7469159 (ppo) LOC11414808 (mtr) LOC25482460 (mtr) LOC100775687 (gma) LOC100786905 (gma) LOC100787262 (gma) LOC101244144 (sly) LOC103873023 (bra) LOC123156848 (tae) LOC123164088 (tae) LOC123407559 (hvu)

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, mito 1, cysk 1, chlo_mito 1	(predict for NP_001077574.1)
cyto 6, nucl 2, chlo 1, mito 1, cysk 1, chlo_mito 1	(predict for NP_173597.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001077574.1)
other 7	(predict for NP_173597.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G21780 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.6	AT2G26210	Ankyrin repeat family protein	[detail]	817161
6.4	AT3G51730	saposin B domain-containing protein	[detail]	824336
6.0	AT4G31410	E3 ubiquitin-protein ligase, putative (DUF1644)	[detail]	829268
5.7	RMR1	receptor homology region transmembrane domain ring H2 motif protein 1	[detail]	836748

Coexpressed
gene list

[Coexpressed gene list for AT1G21780]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262495_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262495_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262495_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838782
Refseq ID (protein)	NP_001077574.1
Refseq ID (protein)	NP_173597.1

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