[←][→] ath   AT1G21880 Gene
functional annotation
Function   lysm domain GPI-anchored protein 1 precursor  
GO BP
GO:0006955 [list] [network] immune response  (326 genes)  IMP  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  IDA  
GO:0031225 [list] [network] anchored component of membrane  (303 genes)  TAS  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0042834 [list] [network] peptidoglycan binding  (2 genes)  IDA  
KEGG
Protein NP_564153.1  NP_849697.1 
BLAST NP_564153.1  NP_849697.1 
Orthologous [Ortholog page] LYM3 (ath)  LOC4330856 (osa)  LOC4340448 (osa)  LOC7463162 (ppo)  LOC11418012 (mtr)  LOC100253893 (vvi)  LOC100283804 (zma)  LOC100383798 (zma)  LOC100777292 (gma)  LOC100808966 (gma)  LOC101245017 (sly)  LOC103638307 (zma)  LOC103835725 (bra)  LOC103853085 (bra)  LOC103873027 (bra) 
Subcellular
localization
wolf
plas 4,  extr 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_564153.1)
extr 6,  vacu 2,  chlo 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for NP_849697.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_564153.1)
scret 9  (predict for NP_849697.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LYM1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 FLA8 FASCICLIN-like arabinogalactan protein 8 [detail] 819155
6.8 SVL1 SHV3-like 1 [detail] 835641
6.6 AT4G36180 Leucine-rich receptor-like protein kinase family protein [detail] 829775
5.6 LYM3 Peptidoglycan-binding LysM domain-containing protein [detail] 844098
Coexpressed
gene list		 [Coexpressed gene list for LYM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260857_at
260857_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260857_at
260857_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260857_at
260857_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838790      
Refseq ID (protein) NP_564153.1 
NP_849697.1 


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