[←][→] ath   At1g21970 Gene
functional annotation
Function   Histone superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045723 [list] [network] positive regulation of fatty acid biosynthetic process  (7 genes)  IMP  
GO:0010262 [list] [network] somatic embryogenesis  (14 genes)  IMP  
GO:0009785 [list] [network] blue light signaling pathway  (24 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (146 genes)  IMP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (159 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IDA IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (105 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_173616.2 
BLAST NP_173616.2 
Orthologous [Ortholog page] LOC547959 (gma)  NF-YB6 (ath)  LOC4330586 (osa)  LOC7458472 (ppo)  LOC7474076 (ppo)  LOC11429280 (mtr)  LOC25494322 (mtr)  LEC1-A (gma)  LEC1-B (gma)  LOC100811633 (gma)  LOC101246718 (sly)  LOC101247020 (sly)  LOC101252139 (sly)  LOC101253433 (sly)  LOC101256476 (sly)  LOC103827627 (bra)  LOC103829359 (bra)  LOC103839510 (bra)  LOC103869085 (bra)  LOC112940645 (sly)  LOC123130885 (tae)  LOC123134451 (tae)  LOC123141729 (tae)  LOC123401975 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  pero 1,  cyto 1,  mito 1  (predict for NP_173616.2)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_173616.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LEC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.0 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 833797
8.1 AT3G24250 glycine-rich protein [detail] 822012
7.0 AT5G38180 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 833798
6.7 CSY1 citrate synthase 1 [detail] 825043
5.4 RGP4 reversibly glycosylated polypeptide 4 [detail] 835147
4.6 NF-YB6 nuclear factor Y, subunit B6 [detail] 834818
4.4 PEI1 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 830642
4.3 AT5G63240 Carbohydrate-binding X8 domain superfamily protein [detail] 836444
Coexpressed
gene list		 [Coexpressed gene list for LEC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260854_at
260854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260854_at
260854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260854_at
260854_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838800      
Refseq ID (protein) NP_173616.2 


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